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SS18L2
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • SS18L2
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:11.9 nTPM
GTEx:26.1 nTPM
FANTOM5:37.7 Scaled Tags Per Million
Pig:28.6 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.9
Sample id Sample description nTPM
Putamen
nTPM: 11.9
2466 Female, age 79, unknown 15.6
1838 Male, age 80, right hemisphere 13.0
1937 Female, age 91, right hemisphere 13.0
1829 Male, age 74, unknown 12.8
2482 Female, age 94, left hemisphere 11.9
2489 Female, age 72, unknown 8.9
2647 Male, age 75, left hemisphere 8.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.1
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 26.1
Samples: 254

Max nTPM: 71.8
Min nTPM: 12.9
Std nTPM: 8.6
Median nTPM: 24.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 71.8
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 61.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 54.0
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 51.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 48.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 47.6
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 46.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 46.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 45.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 45.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 44.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 43.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 43.3
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 41.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 41.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 40.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 40.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 40.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 39.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 39.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 39.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 39.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 38.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 38.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 38.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 37.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 37.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 36.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 36.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 35.9
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 35.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 35.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 35.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 35.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 35.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 34.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 34.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 34.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 33.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 33.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 33.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 33.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 32.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 32.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 32.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 32.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 32.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 32.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 32.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 31.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 31.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 31.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 31.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 31.1
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 31.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 30.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 30.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 30.3
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 30.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 30.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 30.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 30.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 29.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 29.8
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 29.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 29.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 29.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 29.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 29.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 29.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 29.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 29.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 29.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 29.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 29.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 28.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 28.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 28.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 28.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 28.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 28.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 28.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 28.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 28.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 28.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 28.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 28.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 28.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 27.8
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 27.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 27.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 27.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 27.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 27.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 27.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 27.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 26.9
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 26.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 26.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 26.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 26.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 26.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 26.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 26.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 25.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 25.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 25.8
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 25.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 25.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 25.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 25.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 25.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 25.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 25.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 25.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 25.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 25.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 25.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 24.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 24.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 24.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 24.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 24.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 24.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 24.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 24.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 24.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 24.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 24.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 24.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 24.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 24.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 24.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 24.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 24.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 24.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 23.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 23.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 23.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 23.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 23.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 23.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 23.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 23.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 23.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 23.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 23.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 23.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 23.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 23.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 23.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 23.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 22.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 22.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 22.8
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 22.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 22.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 22.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 22.6
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 22.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 22.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 22.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 22.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 22.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 22.0
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 21.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 21.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 21.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 21.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 21.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 21.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 21.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 21.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 21.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 21.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 21.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 21.0
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 21.0
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 20.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 20.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 20.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 20.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 20.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 20.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 20.3
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 20.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 20.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 20.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 20.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 20.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 20.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 20.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 20.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 20.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 20.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 19.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 19.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 19.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 19.8
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 19.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 19.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 19.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 19.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 19.5
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 19.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 19.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 19.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 19.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 19.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 18.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 18.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 18.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 18.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 18.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 18.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 18.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 18.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 18.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 17.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 17.7
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 17.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 17.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 17.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 17.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 17.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 17.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 17.0
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 17.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 17.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 16.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 16.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 16.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 16.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 16.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 16.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 16.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 16.4
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 16.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 16.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 16.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 15.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 15.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 15.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 15.3
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 14.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 14.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 14.4
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 14.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 14.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 14.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 14.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 13.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 12.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 12.9
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

37.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 37.7
FF:10176-103C5 60 years, female 37.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.6
Pig sample Sample description nTPM
Putamen
nTPM: 28.6
Samples: 4

Max nTPM: 35.4
Min nTPM: 24.3
Sample A Female 24.3
Sample B Female 27.8
Sample C Male 35.4
Sample D Male 26.9

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