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PSMB1
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  • TISSUE

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  • PSMB1
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:68.2 nTPM
GTEx:140.0 nTPM
FANTOM5:222.4 Scaled Tags Per Million
Pig:113.0 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.2
Sample id Sample description nTPM
Putamen
nTPM: 68.2
2466 Female, age 79, unknown 85.4
2482 Female, age 94, left hemisphere 84.6
1937 Female, age 91, right hemisphere 79.7
1838 Male, age 80, right hemisphere 73.7
1829 Male, age 74, unknown 59.3
2647 Male, age 75, left hemisphere 49.8
2489 Female, age 72, unknown 44.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.0
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 140.0
Samples: 254

Max nTPM: 257.0
Min nTPM: 50.2
Std nTPM: 28.6
Median nTPM: 135.4
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 257.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 255.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 221.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 212.4
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 208.8
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 208.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 207.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 200.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 200.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 200.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 199.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 197.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 197.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 195.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 194.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 191.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 190.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 189.9
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 187.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 186.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 185.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 182.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 180.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 180.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 179.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 179.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 177.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 176.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 175.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 174.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 173.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 172.0
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 169.6
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 169.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 168.4
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 168.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 168.0
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 167.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 167.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 167.4
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 166.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 166.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 165.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 165.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 164.6
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 164.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 164.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 163.9
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 163.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 163.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 162.4
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 161.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 161.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 160.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 160.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 158.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 157.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 157.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 156.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 155.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 155.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 153.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 153.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 153.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 153.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 152.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 152.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 152.0
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 151.6
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 151.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 151.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 151.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 151.1
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 150.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 150.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 150.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 150.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 149.7
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 149.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 148.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 148.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 148.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 148.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 148.2
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 148.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 147.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 147.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 146.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 146.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 146.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 146.2
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 146.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 146.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 145.3
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 144.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 144.4
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 144.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 143.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 143.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 142.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 142.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 142.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 142.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 142.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 141.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 141.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 140.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 140.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 140.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 140.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 140.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 140.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 139.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 139.5
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 139.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 139.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 139.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 138.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 138.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 138.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 137.5
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 137.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 136.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 136.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 136.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 135.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 135.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 135.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 135.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 134.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 134.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 133.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 133.5
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 132.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 132.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 132.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 132.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 132.1
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 132.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 131.9
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 131.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 131.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 131.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 131.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 130.6
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 130.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 130.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 130.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 130.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 129.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 129.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 129.0
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 128.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 128.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 128.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 128.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 128.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 127.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 127.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 127.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 127.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 127.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 127.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 126.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 126.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 126.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 126.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 125.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 125.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 125.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 124.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 124.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 124.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 123.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 123.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 123.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 122.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 122.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 122.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 122.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 122.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 122.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 122.0
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 121.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 121.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 121.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 120.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 120.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 120.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 120.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 119.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 119.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 118.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 118.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 118.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 118.0
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 117.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 117.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 117.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 117.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 116.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 116.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 116.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 116.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 115.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 115.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 115.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 115.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 115.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 114.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 114.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 114.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 114.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 114.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 114.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 114.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 113.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 113.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 113.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 113.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 113.5
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 113.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 112.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 112.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 112.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 111.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 111.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 111.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 110.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 110.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 110.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 110.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 109.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 108.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 108.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 108.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 107.8
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 107.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 107.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 104.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 104.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 103.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 102.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 102.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 100.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 99.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 99.0
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 98.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 95.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 92.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 92.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 82.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 82.4
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 50.2
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

222.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 222.4
FF:10176-103C5 60 years, female 222.4

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.0
Pig sample Sample description nTPM
Putamen
nTPM: 113.0
Samples: 4

Max nTPM: 154.7
Min nTPM: 88.6
Sample A Female 108.4
Sample B Female 88.6
Sample C Male 154.7
Sample D Male 100.2

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