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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
89.5
nTPM
HPA Brain:
104.5
nTPM
GTEx:
89.5
nTPM
FANTOM5:
417.7
Scaled Tags Per Million
Pig:
61.0
nTPM
Mouse:
121.1
nTPM
Allen mouse:
6.6
Expression energy
MIDBRAIN - Annotated protein expression
Pending normal tissue analysis
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
104.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 86.4
2411
Female, age 72, unknown
116.3
1870
Female, age 42, unknown
116.0
1830
Male, age 51, unknown
108.9
1833
Male, age 53, unknown
99.9
2219
Male, age 76, both hemispheres
84.7
2019
Male, age 18, unknown
82.8
2828
Female, age 72, unknown
75.8
2666
Male, age 74, left hemisphere
69.3
1827
Male, age 72, unknown
67.9
2586
Male, age 75, left hemisphere
42.1
Dorsal raphe nucleus nTPM: 68.1
2750
Male, age 76, both hemispheres
107.4
2016
Female, age 72, unknown
76.0
1828
Male, age 53, unknown
62.2
2298
Female, age 72, unknown
52.3
2047
Male, age 72, unknown
42.7
Inferior colliculus nTPM: 68.7
2849
Male, age 72, unknown
72.0
1848
Female, age 42, unknown
71.4
2097
Female, age 72, unknown
70.9
1890
Male, age 53, unknown
60.5
Median raphe nucleus nTPM: 52.8
2220
Male, age 76, midline
52.8
Periaquaductal grey, anterior nTPM: 61.9
2502
Female, age 75, unknown
82.7
1947
Male, age 18, unknown
60.4
1795
Male, age 51, unknown
42.6
Periaquaductal grey, dorsal nTPM: 51.3
2464
Female, age 72, unknown
72.5
1840
Male, age 53, unknown
49.7
1831
Male, age 72, unknown
46.3
2850
Male, age 76, both hemispheres
36.8
Periaquaductal grey, lateral nTPM: 55.7
2053
Male, age 18, unknown
66.3
2272
Male, age 74, both hemispheres
61.9
2140
Male, age 76, both hemispheres
38.8
Pretectal area nTPM: 62.7
2316
Male, age 76, right hemisphere
87.0
1815
Male, age 53, unknown
85.3
2007
Male, age 72, unknown
71.1
2825
Male, age 18, unknown
71.0
2224
Female, age 72, unknown
66.6
1817
Female, age 42, unknown
65.3
2273
Male, age 74, both hemispheres
62.6
2407
Male, age 75, both hemispheres
62.0
1816
Male, age 51, unknown
42.3
1944
Female, age 72, unknown
39.3
2667
Female, age 75, unknown
37.7
Red nucleus nTPM: 104.5
1821
Female, age 72, unknown
141.2
1865
Male, age 51, unknown
131.5
1904
Male, age 53, unknown
120.1
2823
Male, age 76, right hemisphere
114.5
2503
Female, age 72, unknown
109.6
1954
Female, age 42, unknown
106.4
2227
Male, age 72, unknown
104.1
2769
Male, age 72, unknown
102.0
2725
Female, age 75, unknown
97.8
2785
Male, age 18, unknown
88.9
2588
Male, age 74, left hemisphere
71.5
2584
Male, age 75, left hemisphere
66.3
Substantia nigra nTPM: 88.9
2699
Male, age 18, unknown
107.0
1851
Male, age 51, unknown
106.7
2409
Female, age 72, unknown
105.2
2241
Male, age 72, unknown
96.7
2590
Female, age 75, unknown
93.9
1916
Female, age 42, unknown
93.8
1889
Female, age 72, unknown
89.2
1941
Male, age 53, unknown
75.2
2583
Male, age 75, right hemisphere
70.5
2665
Male, age 74, both hemispheres
50.6
Superior colliculus nTPM: 78.9
1913
Female, age 42, unknown
113.7
1895
Male, age 76, right hemisphere
105.1
1995
Male, age 72, unknown
105.1
2587
Male, age 74, left hemisphere
100.4
1839
Male, age 51, unknown
86.2
2668
Female, age 75, unknown
82.6
1796
Male, age 53, unknown
63.1
2087
Female, age 72, unknown
50.8
2261
Male, age 18, unknown
47.7
2664
Male, age 75, both hemispheres
34.7
Ventral tegmental area nTPM: 83.6
2410
Female, age 72, unknown
113.4
2223
Female, age 72, unknown
87.5
2218
Male, age 76, both hemispheres
84.9
1915
Female, age 42, unknown
82.3
1942
Male, age 51, unknown
67.7
2021
Male, age 53, unknown
66.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
89.5
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 89.5
Samples: 139
Max nTPM: 264.3
Min nTPM: 20.7
Std nTPM: 40.7
Median nTPM: 78.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
264.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
226.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
218.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
203.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
194.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
192.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
176.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
174.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
167.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
166.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
160.9
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
149.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
147.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
140.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
136.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
136.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
136.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
130.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
129.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
129.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
126.3
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
124.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
123.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
123.5
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
122.0
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
118.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
114.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
113.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
110.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
110.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
108.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
105.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
104.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
103.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
102.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
100.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
99.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
98.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
97.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
96.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
94.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
93.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
93.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
93.1
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
92.0
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
90.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
90.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
90.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
88.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
87.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
87.6
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
86.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
86.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
85.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
84.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
84.4
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
84.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
84.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
83.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
83.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
82.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
82.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
82.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
81.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
81.2
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
80.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
80.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
80.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
79.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
78.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
78.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
77.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
77.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
77.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
77.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
76.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
76.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
76.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
75.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
75.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
75.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
74.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
74.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
74.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
74.1
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
74.0
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
73.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
73.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
73.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
72.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
72.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
72.5
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
72.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
72.2
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
71.7
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
71.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
70.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
70.3
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
69.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
69.6
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
68.5
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
67.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
67.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
67.6
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
67.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
66.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
65.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
64.7
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
64.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
63.8
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
63.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
63.0
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
62.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
62.5
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
62.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
61.6
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
58.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
57.5
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
55.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
54.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
54.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
52.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
52.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
52.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
51.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
51.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
49.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
47.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
43.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
43.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
42.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
39.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
35.2
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
34.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
33.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
32.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
31.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
30.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
20.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
121.1
Mouse sample
Sample description
nTPM
Midbrain nTPM: 121.1
Samples: 4
Max nTPM: 126.6
Min nTPM: 116.8
Sample A
Male
120.5
Sample B
Male
126.6
Sample C
Female
120.5
Sample D
Female
116.8
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.