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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
65.7
nTPM
HPA Brain:
62.6
nTPM
GTEx:
65.7
nTPM
FANTOM5:
182.1
Scaled Tags Per Million
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
62.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 53.4
1827
Male, age 72, unknown
58.6
1870
Female, age 42, unknown
57.5
2019
Male, age 18, unknown
57.2
2219
Male, age 76, both hemispheres
56.8
2411
Female, age 72, unknown
54.6
2666
Male, age 74, left hemisphere
52.6
1833
Male, age 53, unknown
50.2
2586
Male, age 75, left hemisphere
49.7
1830
Male, age 51, unknown
48.6
2828
Female, age 72, unknown
47.8
Dorsal raphe nucleus nTPM: 55.4
2047
Male, age 72, unknown
61.7
2298
Female, age 72, unknown
60.5
1828
Male, age 53, unknown
59.0
2750
Male, age 76, both hemispheres
49.4
2016
Female, age 72, unknown
46.4
Inferior colliculus nTPM: 62.6
1890
Male, age 53, unknown
67.5
2097
Female, age 72, unknown
64.4
1848
Female, age 42, unknown
60.6
2849
Male, age 72, unknown
58.0
Median raphe nucleus nTPM: 57.1
2220
Male, age 76, midline
57.1
Periaquaductal grey, anterior nTPM: 55.6
1947
Male, age 18, unknown
61.9
1795
Male, age 51, unknown
52.6
2502
Female, age 75, unknown
52.3
Periaquaductal grey, dorsal nTPM: 52.3
2850
Male, age 76, both hemispheres
60.3
1840
Male, age 53, unknown
54.0
1831
Male, age 72, unknown
50.6
2464
Female, age 72, unknown
44.6
Periaquaductal grey, lateral nTPM: 49.4
2053
Male, age 18, unknown
51.7
2272
Male, age 74, both hemispheres
51.6
2140
Male, age 76, both hemispheres
44.8
Pretectal area nTPM: 60.7
1817
Female, age 42, unknown
74.3
1816
Male, age 51, unknown
70.9
2667
Female, age 75, unknown
69.8
2007
Male, age 72, unknown
69.3
1944
Female, age 72, unknown
67.0
1815
Male, age 53, unknown
59.7
2224
Female, age 72, unknown
56.2
2316
Male, age 76, right hemisphere
53.0
2825
Male, age 18, unknown
51.1
2407
Male, age 75, both hemispheres
50.5
2273
Male, age 74, both hemispheres
46.1
Red nucleus nTPM: 56.5
1821
Female, age 72, unknown
69.9
2725
Female, age 75, unknown
60.9
1865
Male, age 51, unknown
60.4
2785
Male, age 18, unknown
58.7
2823
Male, age 76, right hemisphere
57.4
2503
Female, age 72, unknown
56.6
2588
Male, age 74, left hemisphere
55.3
1954
Female, age 42, unknown
54.9
2584
Male, age 75, left hemisphere
52.0
1904
Male, age 53, unknown
51.9
2769
Male, age 72, unknown
51.8
2227
Male, age 72, unknown
48.6
Substantia nigra nTPM: 61.3
1889
Female, age 72, unknown
75.3
1916
Female, age 42, unknown
71.5
2241
Male, age 72, unknown
67.7
1941
Male, age 53, unknown
63.8
1851
Male, age 51, unknown
60.4
2409
Female, age 72, unknown
60.1
2699
Male, age 18, unknown
57.1
2665
Male, age 74, both hemispheres
56.8
2590
Female, age 75, unknown
55.2
2583
Male, age 75, right hemisphere
45.4
Superior colliculus nTPM: 54.5
1895
Male, age 76, right hemisphere
65.1
2587
Male, age 74, left hemisphere
60.2
2087
Female, age 72, unknown
58.2
1796
Male, age 53, unknown
57.7
1913
Female, age 42, unknown
53.0
2261
Male, age 18, unknown
51.6
2664
Male, age 75, both hemispheres
51.4
2668
Female, age 75, unknown
50.3
1839
Male, age 51, unknown
50.1
1995
Male, age 72, unknown
47.6
Ventral tegmental area nTPM: 55.0
2218
Male, age 76, both hemispheres
58.5
1915
Female, age 42, unknown
57.1
2410
Female, age 72, unknown
56.6
2223
Female, age 72, unknown
56.1
1942
Male, age 51, unknown
54.4
2021
Male, age 53, unknown
47.4
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
65.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 65.7
Samples: 139
Max nTPM: 108.1
Min nTPM: 37.2
Std nTPM: 13.4
Median nTPM: 62.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
108.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
107.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
104.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
101.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
97.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
97.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
96.8
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
96.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
94.8
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
92.2
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
87.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
86.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
85.9
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
85.1
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
82.7
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
81.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
81.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
81.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
80.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
80.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
78.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
78.3
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
76.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
76.4
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
76.1
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
74.9
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
74.6
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
74.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
72.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
72.6
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
72.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
71.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
71.8
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
71.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
71.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
71.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
71.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
71.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
71.0
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
70.3
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
69.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
69.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
69.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
69.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
68.8
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
68.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
68.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
68.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
68.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
68.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
67.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
67.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
67.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
67.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
66.7
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
66.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
65.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
65.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
65.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
64.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
64.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
64.4
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
64.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
64.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
63.8
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
63.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
63.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
62.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
62.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
62.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
62.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
62.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
61.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
61.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
61.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
61.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
61.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
61.3
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
61.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
61.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
60.9
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
60.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
60.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
60.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
60.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
60.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
59.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
59.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
59.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
59.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
59.6
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
59.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
59.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
59.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
58.7
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
58.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
58.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
57.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
57.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
57.4
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
57.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
56.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
56.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
56.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
56.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
56.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
56.3
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
56.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
55.3
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
55.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
55.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
55.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
55.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
54.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
54.9
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
54.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
54.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
54.1
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
54.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
53.8
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
53.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
53.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
53.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
52.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
52.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
52.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
51.9
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
51.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
51.3
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
51.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
50.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
50.3
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
48.9
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
47.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
45.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
45.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
44.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
43.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
37.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.