We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
170.8
nTPM
HPA Brain:
121.6
nTPM
GTEx:
170.8
nTPM
FANTOM5:
170.9
Scaled Tags Per Million
Pig:
35.4
nTPM
Mouse:
52.0
nTPM
Allen mouse:
4.0
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
121.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 108.6
2019
Male, age 18, unknown
124.0
2411
Female, age 72, unknown
117.3
1870
Female, age 42, unknown
115.1
1827
Male, age 72, unknown
114.8
2666
Male, age 74, left hemisphere
113.1
2586
Male, age 75, left hemisphere
105.0
1833
Male, age 53, unknown
104.8
1830
Male, age 51, unknown
102.3
2828
Female, age 72, unknown
100.4
2219
Male, age 76, both hemispheres
89.0
Dorsal raphe nucleus nTPM: 108.2
2298
Female, age 72, unknown
119.6
2750
Male, age 76, both hemispheres
118.7
1828
Male, age 53, unknown
110.8
2047
Male, age 72, unknown
96.1
2016
Female, age 72, unknown
95.6
Inferior colliculus nTPM: 104.8
2097
Female, age 72, unknown
125.9
1890
Male, age 53, unknown
111.2
1848
Female, age 42, unknown
95.8
2849
Male, age 72, unknown
86.2
Median raphe nucleus nTPM: 107.4
2220
Male, age 76, midline
107.4
Periaquaductal grey, anterior nTPM: 102.4
1947
Male, age 18, unknown
107.5
2502
Female, age 75, unknown
107.2
1795
Male, age 51, unknown
92.5
Periaquaductal grey, dorsal nTPM: 90.6
1831
Male, age 72, unknown
93.4
1840
Male, age 53, unknown
93.0
2464
Female, age 72, unknown
90.2
2850
Male, age 76, both hemispheres
85.9
Periaquaductal grey, lateral nTPM: 87.5
2053
Male, age 18, unknown
94.0
2140
Male, age 76, both hemispheres
86.4
2272
Male, age 74, both hemispheres
81.9
Pretectal area nTPM: 108.2
2007
Male, age 72, unknown
133.9
1817
Female, age 42, unknown
132.2
1816
Male, age 51, unknown
127.9
1815
Male, age 53, unknown
125.9
1944
Female, age 72, unknown
118.5
2316
Male, age 76, right hemisphere
100.6
2224
Female, age 72, unknown
94.8
2667
Female, age 75, unknown
93.4
2825
Male, age 18, unknown
90.9
2273
Male, age 74, both hemispheres
89.1
2407
Male, age 75, both hemispheres
83.5
Red nucleus nTPM: 120.1
1821
Female, age 72, unknown
155.3
1904
Male, age 53, unknown
131.6
2503
Female, age 72, unknown
131.1
1865
Male, age 51, unknown
128.4
2785
Male, age 18, unknown
120.7
1954
Female, age 42, unknown
119.2
2769
Male, age 72, unknown
117.2
2227
Male, age 72, unknown
115.4
2725
Female, age 75, unknown
112.3
2588
Male, age 74, left hemisphere
109.5
2823
Male, age 76, right hemisphere
108.6
2584
Male, age 75, left hemisphere
92.2
Substantia nigra nTPM: 121.6
1916
Female, age 42, unknown
145.4
1851
Male, age 51, unknown
140.6
2241
Male, age 72, unknown
131.4
1889
Female, age 72, unknown
127.2
2409
Female, age 72, unknown
127.0
2665
Male, age 74, both hemispheres
117.5
2590
Female, age 75, unknown
116.7
2699
Male, age 18, unknown
105.7
2583
Male, age 75, right hemisphere
104.0
1941
Male, age 53, unknown
100.4
Superior colliculus nTPM: 108.8
2668
Female, age 75, unknown
129.6
2587
Male, age 74, left hemisphere
115.3
1913
Female, age 42, unknown
112.5
1796
Male, age 53, unknown
111.2
2261
Male, age 18, unknown
110.4
1895
Male, age 76, right hemisphere
108.4
2087
Female, age 72, unknown
107.9
1995
Male, age 72, unknown
102.6
1839
Male, age 51, unknown
96.3
2664
Male, age 75, both hemispheres
93.5
Ventral tegmental area nTPM: 110.9
2410
Female, age 72, unknown
131.3
1915
Female, age 42, unknown
121.9
2223
Female, age 72, unknown
119.4
2218
Male, age 76, both hemispheres
107.0
1942
Male, age 51, unknown
96.0
2021
Male, age 53, unknown
89.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
170.8
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 170.8
Samples: 139
Max nTPM: 250.8
Min nTPM: 122.4
Std nTPM: 26.6
Median nTPM: 169.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
250.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
247.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
239.5
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
237.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
233.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
233.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
229.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
225.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
222.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
219.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
219.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
215.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
211.9
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
208.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
204.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
198.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
198.7
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
198.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
195.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
193.9
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
192.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
192.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
192.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
191.5
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
191.4
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
190.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
189.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
189.6
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
189.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
188.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
187.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
187.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
185.1
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
185.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
184.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
184.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
183.0
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
181.9
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
181.3
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
181.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
180.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
180.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
180.0
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
179.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
178.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
177.6
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
177.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
177.3
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
176.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
175.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
175.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
174.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
174.4
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
174.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
174.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
174.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
173.7
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
173.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
173.5
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
173.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
173.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
172.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
172.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
171.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
171.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
170.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
170.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
170.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
170.4
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
169.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
168.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
168.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
168.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
167.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
167.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
166.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
165.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
164.7
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
164.4
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
164.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
164.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
163.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
162.5
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
162.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
162.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
161.7
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
161.5
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
161.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
160.4
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
159.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
159.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
158.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
157.8
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
157.2
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
157.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
157.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
156.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
155.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
155.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
155.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
154.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
154.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
153.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
152.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
151.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
151.5
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
151.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
150.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
150.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
150.4
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
150.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
148.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
147.9
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
147.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
147.0
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
145.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
145.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
144.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
143.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
142.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
141.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
141.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
140.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
137.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
137.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
137.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
136.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
135.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
134.9
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
134.4
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
134.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
133.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
131.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
130.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
130.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
130.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
124.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
122.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
122.4
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
52.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 52.0
Samples: 4
Max nTPM: 55.8
Min nTPM: 47.3
Sample A
Male
53.2
Sample B
Male
51.8
Sample C
Female
55.8
Sample D
Female
47.3
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.