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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
128.0
nTPM
HPA Brain:
170.2
nTPM
GTEx:
128.0
nTPM
FANTOM5:
74.3
Scaled Tags Per Million
Pig:
112.7
nTPM
Mouse:
141.4
nTPM
Allen mouse:
2.4
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
170.2
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 158.0
2666
Male, age 74, left hemisphere
203.6
2586
Male, age 75, left hemisphere
186.6
1827
Male, age 72, unknown
166.8
2019
Male, age 18, unknown
161.9
1870
Female, age 42, unknown
149.2
2828
Female, age 72, unknown
148.4
2219
Male, age 76, both hemispheres
145.7
2411
Female, age 72, unknown
144.3
1833
Male, age 53, unknown
139.6
1830
Male, age 51, unknown
133.6
Dorsal raphe nucleus nTPM: 147.3
1828
Male, age 53, unknown
165.4
2047
Male, age 72, unknown
155.2
2750
Male, age 76, both hemispheres
142.1
2298
Female, age 72, unknown
139.0
2016
Female, age 72, unknown
134.9
Inferior colliculus nTPM: 156.0
1890
Male, age 53, unknown
161.8
2849
Male, age 72, unknown
157.0
2097
Female, age 72, unknown
153.5
1848
Female, age 42, unknown
151.4
Median raphe nucleus nTPM: 153.8
2220
Male, age 76, midline
153.8
Periaquaductal grey, anterior nTPM: 153.6
2502
Female, age 75, unknown
156.8
1947
Male, age 18, unknown
156.2
1795
Male, age 51, unknown
147.7
Periaquaductal grey, dorsal nTPM: 147.3
2850
Male, age 76, both hemispheres
160.8
1831
Male, age 72, unknown
147.0
1840
Male, age 53, unknown
145.9
2464
Female, age 72, unknown
135.4
Periaquaductal grey, lateral nTPM: 145.3
2053
Male, age 18, unknown
156.7
2140
Male, age 76, both hemispheres
144.6
2272
Male, age 74, both hemispheres
134.7
Pretectal area nTPM: 169.6
1816
Male, age 51, unknown
226.8
2007
Male, age 72, unknown
200.9
1817
Female, age 42, unknown
198.0
1815
Male, age 53, unknown
188.6
1944
Female, age 72, unknown
183.0
2407
Male, age 75, both hemispheres
164.9
2667
Female, age 75, unknown
154.4
2825
Male, age 18, unknown
153.7
2316
Male, age 76, right hemisphere
138.3
2224
Female, age 72, unknown
131.1
2273
Male, age 74, both hemispheres
125.8
Red nucleus nTPM: 165.5
2588
Male, age 74, left hemisphere
210.9
2725
Female, age 75, unknown
187.9
2584
Male, age 75, left hemisphere
184.3
1821
Female, age 72, unknown
170.7
2503
Female, age 72, unknown
170.6
1954
Female, age 42, unknown
160.1
2785
Male, age 18, unknown
156.8
1865
Male, age 51, unknown
153.1
2823
Male, age 76, right hemisphere
149.9
1904
Male, age 53, unknown
148.3
2227
Male, age 72, unknown
147.4
2769
Male, age 72, unknown
145.8
Substantia nigra nTPM: 170.2
1916
Female, age 42, unknown
193.3
2665
Male, age 74, both hemispheres
186.5
1889
Female, age 72, unknown
181.5
2241
Male, age 72, unknown
180.9
2583
Male, age 75, right hemisphere
175.6
1941
Male, age 53, unknown
173.8
1851
Male, age 51, unknown
168.3
2699
Male, age 18, unknown
152.9
2590
Female, age 75, unknown
149.3
2409
Female, age 72, unknown
140.0
Superior colliculus nTPM: 156.5
2261
Male, age 18, unknown
173.1
2087
Female, age 72, unknown
168.5
2664
Male, age 75, both hemispheres
167.5
1796
Male, age 53, unknown
163.8
2668
Female, age 75, unknown
163.8
2587
Male, age 74, left hemisphere
159.8
1839
Male, age 51, unknown
150.3
1895
Male, age 76, right hemisphere
147.5
1913
Female, age 42, unknown
136.4
1995
Male, age 72, unknown
134.5
Ventral tegmental area nTPM: 151.6
1915
Female, age 42, unknown
162.7
2223
Female, age 72, unknown
157.8
2218
Male, age 76, both hemispheres
157.7
1942
Male, age 51, unknown
152.0
2410
Female, age 72, unknown
146.4
2021
Male, age 53, unknown
133.4
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
128.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 128.0
Samples: 139
Max nTPM: 216.1
Min nTPM: 73.7
Std nTPM: 28.6
Median nTPM: 123.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
216.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
211.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
206.1
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
202.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
197.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
192.8
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
183.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
179.0
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
177.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
176.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
175.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
173.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
169.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
169.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
168.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
165.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
164.6
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
162.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
158.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
155.9
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
152.6
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
152.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
151.0
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
149.2
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
148.5
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
148.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
148.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
147.6
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
147.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
147.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
147.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
146.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
146.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
146.0
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
145.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
145.6
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
145.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
143.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
143.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
143.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
141.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
140.5
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
140.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
138.7
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
138.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
138.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
137.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
136.9
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
136.8
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
135.8
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
135.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
135.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
135.1
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
134.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
132.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
132.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
130.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
127.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
127.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
126.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
126.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
126.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
126.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
125.0
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
124.6
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
124.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
123.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
123.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
123.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
123.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
122.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
122.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
122.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
122.3
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
121.3
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
120.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
120.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
119.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
119.0
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
118.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
118.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
118.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
117.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
117.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
117.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
116.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
116.8
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
116.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
115.9
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
115.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
114.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
114.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
113.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
113.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
113.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
112.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
112.3
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
112.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
110.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
110.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
110.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
109.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
108.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
108.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
108.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
108.2
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
107.3
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
107.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
106.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
105.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
105.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
103.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
102.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
101.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
101.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
100.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
100.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
99.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
99.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
99.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
98.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
97.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
97.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
97.0
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
96.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
94.8
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
94.0
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
93.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
91.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
90.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
89.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
89.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
89.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
88.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
83.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
80.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
79.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
74.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
73.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
141.4
Mouse sample
Sample description
nTPM
Midbrain nTPM: 141.4
Samples: 4
Max nTPM: 145.6
Min nTPM: 138.4
Sample A
Male
145.6
Sample B
Male
140.4
Sample C
Female
138.4
Sample D
Female
141.2
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.