SINGLE CELL TYPE - SMALL INTESTINEi
Cell type color
Cluster color
Colored according to cell type group
Read count filter: 0
 
051015−6−4−20246810
c-0c-1c-2c-3c-4c-5c-6c-7c-8c-9c-10c-11c-12
Cluster Cell type Expression (nTPM)
0 10
c-0 Proximal enterocytes
c-1 Proximal enterocytes
c-2 Intestinal goblet cells
c-3 Undifferentiated cells
c-4 Proximal enterocytes
c-5 Proximal enterocytes
c-6 Undifferentiated cells
c-7 Proximal enterocytes
c-8 Intestinal goblet cells
c-9 Undifferentiated cells
c-10 Paneth cells
c-11 Enteroendocrine cells
c-12 Mixed immune cells
SINGLE CELL TYPE TABULA SAPIENS - SMALL INTESTINEi
Cell type color
Cluster color
Colored according to cell type group
Read count filter: 0
 
05101520−5051015
c-0c-1c-2c-3c-4c-5c-6c-7c-8c-9c-10c-11c-12c-13c-14c-15c-16c-17c-18c-19c-20
Cluster Cell type Expression (nTPM)
0 10
c-0 Cd4-positive, alpha-beta t cell
c-1 Enterocyte of epithelium of small intestine
c-2 Neutrophil
c-3 Transit amplifying cell of small intestine
c-4 Small intestine goblet cell
c-5 Cd8-positive, alpha-beta t cell
c-6 B cell
c-7 Monocyte
c-8 Paneth cell of epithelium of small intestine
c-9 Intestinal tuft cell
c-10 Plasma cell
c-11 Mast cell
c-12 Fibroblast
c-13 Intestinal enteroendocrine cell
c-14 Gut endothelial cell
c-15 Intestinal crypt stem cell of small intestine
c-16 Intestinal crypt stem cell
c-17 Immature enterocyte
c-18 Goblet cell
c-19 Mature enterocyte
c-20 Duodenum glandular cell
CELL TYPE MARKERSi
SINGLE CELL TYPE
TABULA SAPIENS
Max-norm
Z-score
Fraction of highest expression (≥1 nTPM)
ENSG00000268083CD19CR2MS4A1GZMBIL3RACEBPEHDCMS4A2CD163CD68MARCOMRC1MSR1FCGR3AKIR2DL4PIM2CD3ECD4CD8AFOXP3IL17ACHGACHGBSCG5CD34PECAM1SELESLC2A1VWFCDH17KRT20SLC26A3CLCA1MUC5ACSPDEFSPINK4TFF3CA4CA7SPIBALPIMBPMPZS100BSOX10COL3A1FBN1LUMACTA2ACTG2CNN1MYH11ASCL2MKI67PLA2G2AProximal enterocytes c-0Proximal enterocytes c-1Intestinal goblet cells c-2Undifferentiated cells c-3Proximal enterocytes c-4Proximal enterocytes c-5Undifferentiated cells c-6Proximal enterocytes c-7Intestinal goblet cells c-8Undifferentiated cells c-9Paneth cells c-10Enteroendocrine cells c-11Mixed immune cells c-12Current geneB-cellsDendritic cellsGranulocytesMacrophagesMonocytesNK-cellsPlasma cellsT-cellsEnteroendocrine cellsEndothelial cellsEnterocytesIntestinal goblet cellsPaneth cellsProximal enterocytesSchwann cellsFibroblastsSmooth muscle cellsUndifferentiated cells00.250.50.751
 

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