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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Low
Neuronal cells:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
160.7
nTPM
HPA Brain:
163.4
nTPM
GTEx:
160.7
nTPM
FANTOM5:
350.1
Scaled Tags Per Million
Mouse:
351.5
nTPM
Allen mouse:
4.6
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA036287
Glial cells
Low
Neuronal cells
Medium
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
163.4
Sample id
Sample description
nTPM
Hippocampus nTPM: 118.6
1911
Female, age 85, right hemisphere
164.3
2529
Female, age 94, left hemisphere
140.0
2621
Female, age 67, right hemisphere
117.6
1898
Male, age 80, left hemisphere
109.2
2148
Female, age 91, left hemisphere
101.9
1855
Male, age 76, left hemisphere
78.5
Dentate gyrus nTPM: 117.1
2530
Female, age 94, left hemisphere
158.3
2528
Male, age 74, both hemispheres
151.4
2010
Male, age 76, both hemispheres
135.6
2246
Female, age 85, both hemispheres
110.8
2531
Female, age 67, both hemispheres
78.6
1927
Female, age 91, both hemispheres
67.7
Entorhinal gyrus nTPM: 105.6
2117
Female, age 91, right hemisphere
210.2
2764
Male, age 80, right hemisphere
129.0
1938
Female, age 85, left hemisphere
95.2
1787
Male, age 76, left hemisphere
85.9
2613
Female, age 94, left hemisphere
63.4
2686
Male, age 75, right hemisphere
49.9
Hippocampus, CA1 nTPM: 95.9
2527
Male, age 74, both hemispheres
126.3
2082
Female, age 91, right hemisphere
118.5
1873
Female, age 85, both hemispheres
111.2
2749
Male, age 80, left hemisphere
76.9
2045
Male, age 76, both hemispheres
46.4
Hippocampus, CA2 nTPM: 138.8
2249
Male, age 74, both hemispheres
209.0
1963
Male, age 80, left hemisphere
184.4
2113
Female, age 91, right hemisphere
129.3
1940
Female, age 85, left hemisphere
127.4
2437
Female, age 94, left hemisphere
121.0
1892
Male, age 76, both hemispheres
61.7
Hippocampus, CA3 nTPM: 94.4
1891
Female, age 85, both hemispheres
181.5
2436
Male, age 74, both hemispheres
122.9
1867
Male, age 76, both hemispheres
98.0
2620
Female, age 94, left hemisphere
67.3
2137
Male, age 80, left hemisphere
54.5
2861
Female, age 67, both hemispheres
42.6
Parahippocampal cortex nTPM: 88.5
1990
Female, age 91, right hemisphere
123.0
2532
Female, age 72, left hemisphere
119.3
2018
Male, age 76, both hemispheres
115.0
2692
Male, age 74, both hemispheres
98.8
2245
Female, age 91, both hemispheres
97.3
1933
Female, age 85, both hemispheres
89.9
1850
Male, age 80, both hemispheres
77.4
2250
Female, age 67, right hemisphere
66.0
2693
Female, age 94, both hemispheres
55.0
2622
Female, age 67, right hemisphere
43.9
Perirhinal gyrus nTPM: 63.0
2521
Female, age 94, right hemisphere
96.7
1847
Female, age 91, left hemisphere
57.9
2848
Male, age 76, right hemisphere
54.8
1841
Female, age 85, right hemisphere
53.8
1794
Male, age 80, right hemisphere
52.1
Subiculum nTPM: 163.4
2042
Male, age 76, both hemispheres
223.6
1901
Male, age 80, both hemispheres
186.7
1977
Female, age 85, both hemispheres
179.4
2438
Female, age 94, left hemisphere
134.4
2619
Male, age 74, both hemispheres
133.0
2729
Female, age 91, right hemisphere
123.4
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
160.7
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 160.7
Samples: 197
Max nTPM: 539.6
Min nTPM: 30.0
Std nTPM: 100.7
Median nTPM: 131.8
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
539.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
515.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
464.0
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
436.4
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
390.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
382.6
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
380.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
378.1
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
367.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
364.6
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
363.8
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
345.6
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
340.8
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
338.2
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
334.5
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
324.8
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
315.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
311.5
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
310.9
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
309.4
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
305.7
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
303.1
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
297.8
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
289.0
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
288.3
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
284.8
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
277.9
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
276.0
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
269.7
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
264.9
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
262.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
261.0
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
260.7
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
260.4
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
257.2
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
255.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
254.4
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
253.0
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
248.3
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
247.5
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
235.0
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
233.7
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
230.6
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
230.4
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
226.3
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
224.9
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
223.6
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
223.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
218.3
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
218.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
212.3
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
211.0
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
209.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
209.7
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
208.7
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
206.1
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
205.7
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
205.1
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
202.5
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
202.3
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
200.9
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
197.5
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
196.6
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
194.4
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
191.0
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
186.9
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
183.0
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
179.0
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
176.9
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
173.7
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
171.8
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
169.7
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
168.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
167.7
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
167.5
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
165.6
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
165.2
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
164.7
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
164.2
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
163.2
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
162.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
160.3
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
158.4
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
158.2
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
154.0
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
153.6
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
152.1
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
149.8
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
145.9
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
143.7
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
142.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
140.3
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
139.4
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
139.0
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
135.9
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
135.6
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
133.5
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
131.8
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
131.8
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
131.8
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
131.5
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
126.7
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
123.5
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
118.5
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
117.1
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
116.8
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
115.8
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
115.1
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
114.9
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
113.2
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
112.7
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
112.3
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
112.0
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
111.9
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
111.6
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
111.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
109.7
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
109.5
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
108.4
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
107.9
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
107.3
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
105.8
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
105.2
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
103.5
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
102.7
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
101.1
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
99.3
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
97.5
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
97.4
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
97.3
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
96.8
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
96.6
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
94.3
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
94.2
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
94.0
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
93.3
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
93.0
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
91.7
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
91.7
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
91.5
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
90.6
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
90.1
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
89.7
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
88.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
87.1
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
86.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
84.6
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
83.9
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
83.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
80.9
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
78.7
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
78.1
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
77.2
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
76.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
76.0
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
75.9
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
75.8
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
74.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
73.9
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
73.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
73.1
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
72.6
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
70.8
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
70.5
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
70.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
70.2
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
69.3
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
68.3
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
68.1
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
65.5
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
64.6
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
62.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
60.3
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
58.2
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
57.1
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
56.4
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
56.3
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
55.6
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
54.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
54.9
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
54.5
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
54.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
54.3
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
53.5
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
52.4
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
51.6
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
51.6
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
51.4
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
50.1
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
47.3
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
45.6
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
45.4
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
44.0
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
35.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
31.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
30.2
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
30.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
351.5
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 351.6
Samples: 4
Max nTPM: 422.5
Min nTPM: 302.9
Sample A
Male
339.1
Sample B
Male
302.9
Sample C
Female
422.5
Sample D
Female
341.7
Hippocampal formation nTPM: 312.5
Samples: 4
Max nTPM: 345.2
Min nTPM: 250.9
Sample A
Male
345.2
Sample B
Male
250.9
Sample C
Female
311.2
Sample D
Female
342.6
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.