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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
97.8
nTPM
HPA Brain:
182.7
nTPM
GTEx:
97.8
nTPM
FANTOM5:
279.8
Scaled Tags Per Million
Mouse:
358.3
nTPM
Allen mouse:
4.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
182.7
Sample id
Sample description
nTPM
Amygdala nTPM: 182.7
2814
Male, age 76, right hemisphere
272.7
2695
Female, age 67, right hemisphere
187.9
1987
Female, age 91, left hemisphere
167.2
2514
Male, age 75, right hemisphere
163.6
2517
Female, age 94, left hemisphere
122.4
Basal amygdala nTPM: 99.7
1955
Male, age 76, both hemispheres
128.5
2110
Male, age 80, left hemisphere
123.1
2609
Male, age 75, right hemisphere
122.4
2685
Female, age 94, left hemisphere
81.5
2827
Female, age 67, right hemisphere
75.2
2243
Female, age 91, right hemisphere
67.4
Central amygdala nTPM: 119.5
1905
Male, age 76, both hemispheres
191.0
2515
Male, age 75, right hemisphere
139.7
2239
Male, age 80, left hemisphere
102.1
2701
Female, age 91, right hemisphere
86.8
2826
Female, age 94, left hemisphere
77.8
Corticomedial amygdala nTPM: 86.1
2428
Male, age 75, right hemisphere
117.6
2240
Male, age 76, both hemispheres
107.9
2429
Female, age 94, left hemisphere
99.5
2535
Female, age 67, right hemisphere
73.2
2829
Male, age 80, left hemisphere
60.0
2242
Female, age 91, right hemisphere
58.2
Lateral amygdala nTPM: 137.4
1883
Male, age 76, both hemispheres
241.7
2516
Male, age 75, right hemisphere
142.8
2256
Male, age 80, left hemisphere
142.7
2534
Female, age 94, left hemisphere
111.1
2255
Female, age 91, right hemisphere
96.0
2830
Female, age 67, right hemisphere
90.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
97.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 97.8
Samples: 152
Max nTPM: 370.4
Min nTPM: 33.9
Std nTPM: 57.3
Median nTPM: 80.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
370.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
341.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
295.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
293.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
285.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
279.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
272.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
246.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
213.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
172.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
160.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
159.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
155.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
153.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
152.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
150.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
146.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
145.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
138.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
137.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
137.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
135.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
132.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
132.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
129.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
124.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
122.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
121.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
121.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
120.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
119.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
118.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
118.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
116.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
113.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
112.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
111.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
110.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
109.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
109.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
108.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
108.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
107.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
107.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
107.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
106.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
105.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
102.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
99.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
99.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
98.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
98.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
98.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
98.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
96.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
96.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
96.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
95.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
95.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
94.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
94.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
94.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
93.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
93.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
92.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
91.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
91.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
89.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
88.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
88.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
88.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
82.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
82.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
82.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
80.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
80.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
79.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
79.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
79.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
79.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
78.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
78.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
78.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
77.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
77.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
76.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
76.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
76.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
75.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
75.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
75.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
75.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
75.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
74.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
74.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
74.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
73.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
73.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
72.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
71.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
71.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
71.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
70.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
70.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
69.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
69.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
69.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
69.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
68.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
66.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
66.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
66.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
65.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
65.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
65.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
64.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
63.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
62.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
61.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
60.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
60.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
60.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
59.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
58.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
58.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
57.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
57.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
55.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
55.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
54.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
54.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
53.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
53.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
52.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
52.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
52.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
51.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
51.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
49.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
47.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
44.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
44.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
44.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
43.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
42.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
42.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
39.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
38.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
36.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
36.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
36.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
33.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
358.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 358.3
Samples: 4
Max nTPM: 450.8
Min nTPM: 285.8
Sample A
Male
285.8
Sample B
Male
305.2
Sample C
Female
450.8
Sample D
Female
391.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.