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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
186.6
nTPM
HPA Brain:
141.4
nTPM
GTEx:
186.6
nTPM
FANTOM5:
45.3
Scaled Tags Per Million
Pig:
58.8
nTPM
Mouse:
105.4
nTPM
Allen mouse:
5.9
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
141.4
Sample id
Sample description
nTPM
Amygdala nTPM: 88.1
2814
Male, age 76, right hemisphere
134.5
2517
Female, age 94, left hemisphere
105.8
1987
Female, age 91, left hemisphere
84.3
2695
Female, age 67, right hemisphere
60.7
2514
Male, age 75, right hemisphere
55.4
Basal amygdala nTPM: 141.4
2685
Female, age 94, left hemisphere
197.9
2827
Female, age 67, right hemisphere
170.5
2243
Female, age 91, right hemisphere
140.8
2110
Male, age 80, left hemisphere
118.8
1955
Male, age 76, both hemispheres
110.3
2609
Male, age 75, right hemisphere
109.9
Central amygdala nTPM: 138.7
2826
Female, age 94, left hemisphere
263.2
2239
Male, age 80, left hemisphere
127.1
1905
Male, age 76, both hemispheres
122.3
2701
Female, age 91, right hemisphere
105.2
2515
Male, age 75, right hemisphere
75.7
Corticomedial amygdala nTPM: 117.6
2535
Female, age 67, right hemisphere
154.2
2829
Male, age 80, left hemisphere
148.6
2429
Female, age 94, left hemisphere
122.4
2242
Female, age 91, right hemisphere
110.9
2240
Male, age 76, both hemispheres
90.8
2428
Male, age 75, right hemisphere
78.7
Lateral amygdala nTPM: 132.0
2534
Female, age 94, left hemisphere
229.9
2830
Female, age 67, right hemisphere
141.0
1883
Male, age 76, both hemispheres
117.0
2256
Male, age 80, left hemisphere
113.9
2255
Female, age 91, right hemisphere
111.2
2516
Male, age 75, right hemisphere
79.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
186.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 186.6
Samples: 152
Max nTPM: 807.1
Min nTPM: 27.0
Std nTPM: 94.0
Median nTPM: 175.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
807.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
523.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
404.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
390.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
387.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
386.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
347.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
339.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
325.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
323.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
311.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
306.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
302.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
300.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
294.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
294.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
291.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
289.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
284.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
282.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
274.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
273.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
264.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
260.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
259.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
250.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
239.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
235.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
233.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
233.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
232.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
226.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
225.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
224.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
223.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
222.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
222.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
221.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
219.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
218.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
216.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
215.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
214.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
214.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
213.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
210.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
208.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
207.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
206.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
205.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
204.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
203.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
201.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
201.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
200.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
199.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
198.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
195.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
194.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
193.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
190.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
190.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
189.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
189.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
187.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
186.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
183.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
183.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
181.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
181.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
180.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
179.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
178.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
177.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
177.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
176.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
175.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
175.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
174.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
174.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
173.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
171.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
169.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
168.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
167.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
166.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
164.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
163.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
162.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
162.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
161.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
158.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
157.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
157.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
154.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
153.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
153.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
150.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
149.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
148.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
141.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
140.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
140.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
138.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
138.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
138.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
137.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
134.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
133.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
133.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
131.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
129.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
129.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
128.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
127.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
126.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
125.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
123.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
121.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
114.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
112.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
112.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
112.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
110.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
110.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
109.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
108.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
105.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
105.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
104.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
102.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
102.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
100.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
99.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
93.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
93.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
93.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
92.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
90.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
86.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
81.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
80.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
72.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
70.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
70.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
69.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
66.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
65.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
62.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
62.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
47.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
27.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
105.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 105.4
Samples: 4
Max nTPM: 122.2
Min nTPM: 95.8
Sample A
Male
96.6
Sample B
Male
106.9
Sample C
Female
122.2
Sample D
Female
95.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.