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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
64.4
nTPM
HPA Brain:
46.5
nTPM
GTEx:
64.4
nTPM
FANTOM5:
38.5
Scaled Tags Per Million
Pig:
22.8
nTPM
Mouse:
16.6
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
46.5
Sample id
Sample description
nTPM
Amygdala nTPM: 33.4
2517
Female, age 94, left hemisphere
44.0
1987
Female, age 91, left hemisphere
37.2
2514
Male, age 75, right hemisphere
31.6
2695
Female, age 67, right hemisphere
28.3
2814
Male, age 76, right hemisphere
25.9
Basal amygdala nTPM: 45.4
2243
Female, age 91, right hemisphere
58.6
2110
Male, age 80, left hemisphere
53.0
2685
Female, age 94, left hemisphere
48.1
2609
Male, age 75, right hemisphere
40.1
1955
Male, age 76, both hemispheres
36.6
2827
Female, age 67, right hemisphere
35.7
Central amygdala nTPM: 42.7
2239
Male, age 80, left hemisphere
52.1
2701
Female, age 91, right hemisphere
49.1
2826
Female, age 94, left hemisphere
45.9
2515
Male, age 75, right hemisphere
40.7
1905
Male, age 76, both hemispheres
25.9
Corticomedial amygdala nTPM: 46.5
2829
Male, age 80, left hemisphere
56.4
2242
Female, age 91, right hemisphere
46.3
2429
Female, age 94, left hemisphere
46.0
2535
Female, age 67, right hemisphere
45.1
2240
Male, age 76, both hemispheres
43.4
2428
Male, age 75, right hemisphere
42.0
Lateral amygdala nTPM: 40.0
2256
Male, age 80, left hemisphere
48.4
2534
Female, age 94, left hemisphere
47.5
2255
Female, age 91, right hemisphere
46.6
2516
Male, age 75, right hemisphere
33.4
1883
Male, age 76, both hemispheres
33.0
2830
Female, age 67, right hemisphere
31.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
64.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 64.4
Samples: 152
Max nTPM: 312.8
Min nTPM: 5.7
Std nTPM: 34.6
Median nTPM: 58.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
312.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
214.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
151.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
130.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
124.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
123.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
123.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
117.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
117.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
113.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
112.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
106.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
102.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
97.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
93.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
91.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
90.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
89.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
89.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
89.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
88.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
88.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
88.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
87.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
86.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
85.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
85.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
83.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
83.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
83.1
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
82.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
82.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
81.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
80.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
80.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
79.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
78.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
78.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
78.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
78.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
78.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
78.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
78.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
78.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
77.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
75.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
75.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
75.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
74.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
74.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
74.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
73.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
71.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
68.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
67.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
67.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
67.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
66.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
66.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
66.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
66.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
64.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
64.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
62.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
62.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
62.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
62.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
61.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
61.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
60.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
60.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
59.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
59.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
59.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
59.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
58.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
58.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
57.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
57.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
57.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
57.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
55.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
55.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
55.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
55.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
55.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
54.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
54.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
54.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
53.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
53.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
53.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
52.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
52.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
52.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
51.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
51.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
50.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
50.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
50.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
49.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
49.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
49.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
47.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
47.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
46.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
45.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
45.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
45.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
45.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
45.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
45.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
44.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
44.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
44.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
43.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
43.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
43.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
41.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
41.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
41.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
40.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
40.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
38.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
38.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
37.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
37.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
36.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
36.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
34.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
34.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
34.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
34.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
33.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
33.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
32.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
32.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
31.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
30.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
29.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
29.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
29.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
28.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
28.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
26.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
25.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
25.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
25.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
19.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
18.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
16.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
5.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
16.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 16.6
Samples: 4
Max nTPM: 24.0
Min nTPM: 10.0
Sample A
Male
19.3
Sample B
Male
13.0
Sample C
Female
10.0
Sample D
Female
24.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.