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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
42.8
nTPM
FANTOM5:
1.9
Scaled Tags Per Million
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
42.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 23.3
2301
Female, age 85, both hemispheres
31.0
1984
Male, age 76, both hemispheres
28.7
2188
Female, age 91, both hemispheres
19.0
2090
Male, age 80, both hemispheres
14.6
Dorsal cochlear nucleus nTPM: 13.0
2058
Male, age 76, both hemispheres
16.3
2187
Female, age 91, both hemispheres
15.8
2370
Male, age 61, both hemispheres
13.2
2802
Male, age 74, right hemisphere
10.3
2378
Male, age 80, both hemispheres
9.1
Dorsal tegmental nucleus nTPM: 14.2
2358
Male, age 61, both hemispheres
17.5
2326
Male, age 74, both hemispheres
14.5
1936
Male, age 76, left hemisphere
14.1
2083
Male, age 80, both hemispheres
10.5
Dorsolateral tegmental area nTPM: 11.7
2360
Male, age 74, both hemispheres
14.0
2141
Male, age 76, both hemispheres
12.7
2654
Male, age 80, both hemispheres
11.4
2751
Female, age 85, both hemispheres
10.8
2337
Male, age 61, both hemispheres
9.8
Kolliker-Fuse nucleus nTPM: 16.8
2793
Female, age 91, left hemisphere
25.3
2315
Male, age 76, right hemisphere
13.9
2163
Male, age 80, both hemispheres
11.2
Lateral lemniscal nuclei nTPM: 40.0
2036
Male, age 80, both hemispheres
51.8
2169
Male, age 76, both hemispheres
48.0
2320
Female, age 91, left hemisphere
36.2
2746
Female, age 85, left hemisphere
32.7
2453
Male, age 74, right hemisphere
31.5
Lateral parabrachial nucleus nTPM: 24.0
2139
Female, age 85, right hemisphere
32.1
2013
Male, age 80, both hemispheres
30.5
2790
Male, age 61, both hemispheres
19.0
2792
Male, age 76, both hemispheres
14.3
Lateral vestibular nucleus nTPM: 12.9
2184
Male, age 76, both hemispheres
13.0
2311
Male, age 80, both hemispheres
12.9
Locus coeruleus nTPM: 11.6
2788
Male, age 74, unknown
13.8
2162
Male, age 80, both hemispheres
12.9
1980
Male, age 76, both hemispheres
12.1
2720
Male, age 74, both hemispheres
11.8
2317
Female, age 72, unknown
11.5
2014
Male, age 55, unknown
11.3
2123
Female, age 91, both hemispheres
7.7
Medial parabrachial nucleus nTPM: 16.9
2854
Male, age 80, both hemispheres
27.8
2156
Male, age 61, both hemispheres
16.5
2463
Female, age 85, right hemisphere
16.2
2786
Male, age 76, both hemispheres
15.3
2170
Female, age 91, both hemispheres
8.5
Medial periolivary nuclei nTPM: 32.5
2171
Female, age 85, both hemispheres
43.7
2063
Male, age 76, both hemispheres
40.8
2458
Female, age 91, both hemispheres
30.9
2081
Male, age 80, both hemispheres
26.4
2791
Male, age 74, right hemisphere
20.7
Motor facial nucleus nTPM: 34.7
2327
Male, age 80, both hemispheres
70.6
2062
Male, age 76, both hemispheres
37.1
2697
Female, age 85, both hemispheres
30.3
2365
Male, age 74, right hemisphere
29.4
2795
Female, age 91, both hemispheres
26.0
2126
Male, age 61, both hemispheres
14.8
Motor trigeminal nucleus nTPM: 24.7
2079
Male, age 80, both hemispheres
52.1
2321
Female, age 91, both hemispheres
21.3
2560
Male, age 74, both hemispheres
20.3
2335
Male, age 61, both hemispheres
15.1
2309
Male, age 76, both hemispheres
15.0
Nuclei of the trapezoid body nTPM: 39.1
2735
Female, age 85, both hemispheres
50.6
1983
Male, age 76, both hemispheres
39.0
2166
Male, age 80, both hemispheres
36.5
2368
Female, age 91, both hemispheres
35.8
2159
Male, age 61, both hemispheres
33.6
Nucleus raphe magnus nTPM: 40.3
2172
Female, age 85, both hemispheres
52.9
2328
Male, age 80, both hemispheres
48.5
2455
Male, age 74, both hemispheres
42.4
2160
Male, age 61, both hemispheres
37.5
2459
Female, age 91, both hemispheres
32.1
2051
Male, age 76, both hemispheres
28.4
Paramedian reticular nucleus nTPM: 14.7
2050
Female, age 85, both hemispheres
19.8
2052
Male, age 76, both hemispheres
17.4
2313
Male, age 61, both hemispheres
12.2
2057
Male, age 80, both hemispheres
9.4
Pedunculopontine tegmental nucleus nTPM: 15.6
2338
Male, age 61, both hemispheres
20.0
1921
Female, age 85, both hemispheres
14.4
2334
Male, age 80, both hemispheres
12.4
Pontine nuclei nTPM: 31.5
1863
Male, age 55, unknown
41.1
2787
Female, age 85, both hemispheres
37.7
2115
Male, age 80, left hemisphere
35.5
1968
Male, age 76, left hemisphere
33.9
2727
Male, age 61, right hemisphere
33.9
2319
Female, age 91, both hemispheres
24.4
2454
Male, age 74, left hemisphere
23.3
2109
Female, age 72, unknown
22.1
Pontine raphe nucleus nTPM: 20.8
2122
Female, age 85, midline
26.5
2853
Male, age 76, midline
15.0
Posteroventral cochlear nucleus nTPM: 12.3
2752
Female, age 85, both hemispheres
16.6
2371
Male, age 61, both hemispheres
14.4
2070
Male, age 76, both hemispheres
13.5
2135
Female, age 91, both hemispheres
9.0
2341
Male, age 80, both hemispheres
7.7
Principal sensory trigeminal nucleus nTPM: 34.1
2008
Male, age 80, left hemisphere
55.8
2158
Male, age 61, both hemispheres
37.4
2367
Female, age 91, left hemisphere
27.8
2324
Male, age 76, both hemispheres
15.6
Reticular pontine nucleus, caudal nTPM: 33.4
2332
Male, age 80, right hemisphere
59.2
2457
Female, age 91, both hemispheres
30.9
2092
Male, age 76, both hemispheres
29.1
2559
Male, age 74, both hemispheres
14.6
Reticular pontine nucleus, oral nTPM: 27.2
2361
Male, age 74, both hemispheres
60.8
2366
Female, age 91, both hemispheres
31.2
2012
Female, age 85, both hemispheres
24.5
2167
Male, age 76, both hemispheres
11.0
1939
Male, age 80, both hemispheres
8.6
Reticulotegmental nucleus nTPM: 19.9
2325
Male, age 76, both hemispheres
30.1
2333
Male, age 80, both hemispheres
21.2
2322
Female, age 91, both hemispheres
15.8
2452
Male, age 74, both hemispheres
12.6
Spinal trigeminal nucleus, oral nTPM: 17.1
1978
Male, age 76, both hemispheres
19.7
2737
Female, age 85, both hemispheres
18.8
2164
Male, age 80, both hemispheres
12.8
Subcoeruleus area nTPM: 23.2
2089
Male, age 76, left hemisphere
45.1
1958
Male, age 80, both hemispheres
34.0
2323
Female, age 91, left hemisphere
16.4
2451
Male, age 74, both hemispheres
11.0
2369
Female, age 85, left hemisphere
9.5
Superior olive nTPM: 33.6
2329
Male, age 80, right hemisphere
44.1
1875
Female, age 85, both hemispheres
40.3
2561
Female, age 91, both hemispheres
30.6
2020
Male, age 76, both hemispheres
30.0
2364
Male, age 74, right hemisphere
23.2
Ventral periolivary nuclei nTPM: 42.8
2130
Female, age 85, both hemispheres
53.8
2165
Male, age 80, both hemispheres
46.0
2794
Female, age 91, left hemisphere
40.9
2023
Male, age 76, both hemispheres
30.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 27.5
2161
Male, age 80, both hemispheres
41.7
1959
Male, age 76, both hemispheres
36.3
2449
Male, age 74, both hemispheres
35.8
2456
Female, age 91, both hemispheres
22.4
2840
Female, age 85, both hemispheres
19.4
2359
Male, age 61, both hemispheres
9.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.