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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
184.1
nTPM
GTEx:
184.1
nTPM
FANTOM5:
89.4
Scaled Tags Per Million
Pig:
58.5
nTPM
Mouse:
211.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
184.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 184.1
Samples: 105
Max nTPM: 355.0
Min nTPM: 96.5
Std nTPM: 50.8
Median nTPM:
415_1
77 years, female
355.0
490_1
67 years, female
334.9
466_1
57 years, female
316.3
414_1
84 years, female
316.2
491_1
89 years, female
293.0
32_1
67 years, male
289.5
217_1
76 years, male
275.3
149_1
88 years, male
275.1
162_1
79 years, female
259.8
413_1
59 years, female
256.1
81_1
67 years, male
252.3
246_1
77 years, male
250.1
43_1
64 years, female
242.1
237_1
82 years, male
235.1
355_1
70 years, female
231.8
495_1
57 years, female
229.0
324_1
76 years, male
223.4
265_1
87 years, male
222.1
389_1
86 years, female
221.8
468_1
89 years, male
221.5
229_1
69 years, female
220.0
172_1
72 years, female
219.1
352_1
62 years, male
217.3
425_1
59 years, female
216.4
375_1
74 years, female
216.3
142_1
61 years, female
214.5
126_1
63 years, male
212.3
526_1
61 years, male
210.1
153_1
70 years, female
209.3
115_1
83 years, male
208.0
405_1
91 years, male
204.3
307_1
66 years, female
203.7
35_1
74 years, female
203.3
499_1
55 years, female
202.7
89_1
63 years, male
200.2
6_1
73 years, female
197.2
347_1
72 years, male
194.6
117_1
61 years, male
192.1
518_1
75 years, female
191.0
386_1
76 years, male
187.0
266_1
85 years, male
186.9
447_1
81 years, male
186.5
254_1
77 years, female
185.6
9_1
66 years, female
182.7
243_1
75 years, male
182.4
42_1
85 years, male
178.5
316_1
62 years, male
178.3
404_1
82 years, female
177.5
189_1
76 years, male
177.2
251_1
78 years, male
176.9
291_1
76 years, male
176.7
137_1
83 years, male
176.5
517_1
88 years, male
175.2
288_1
66 years, female
170.9
379_1
60 years, male
170.4
311_1
78 years, male
170.0
503_1
68 years, male
168.2
313_1
79 years, female
167.9
322_1
76 years, male
167.9
119_1
70 years, female
167.7
139_1
64 years, female
166.8
348_1
84 years, male
166.4
315_1
62 years, female
164.3
384_1
83 years, male
163.4
145_1
84 years, male
162.6
321_1
62 years, female
162.3
292_1
71 years, male
161.4
394_1
75 years, female
161.1
377_1
82 years, female
158.8
396_1
62 years, male
157.4
286_1
68 years, female
157.1
335_1
73 years, female
157.0
173_1
67 years, male
155.8
18_1
88 years, male
155.2
354_1
81 years, female
155.1
17_1
71 years, male
154.9
99_1
64 years, male
153.9
350_1
84 years, female
152.2
293_1
68 years, female
148.2
318_1
68 years, male
147.9
406_1
79 years, male
147.9
177_1
74 years, male
147.0
319_1
81 years, male
145.4
120_1
70 years, female
144.6
480_1
63 years, male
142.5
353_1
82 years, female
142.4
501_1
88 years, male
140.8
163_1
78 years, male
139.6
264_1
73 years, female
137.9
2_1
77 years, female
137.3
314_1
67 years, male
136.1
317_1
60 years, male
133.0
349_1
83 years, male
132.2
109_1
81 years, female
129.4
320_1
89 years, female
129.3
218_1
71 years, female
125.5
356_1
87 years, female
124.1
4_1
88 years, female
123.8
376_1
75 years, female
122.6
308_1
70 years, female
114.4
351_1
91 years, male
112.2
41_1
94 years, female
110.1
452_1
88 years, female
107.2
506_1
65 years, male
98.6
295_1
61 years, female
96.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.