We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
43.7
nTPM
HPA Brain:
125.6
nTPM
GTEx:
43.7
nTPM
FANTOM5:
93.1
Scaled Tags Per Million
Pig:
138.6
nTPM
Mouse:
345.4
nTPM
Allen mouse:
9.2
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
125.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 101.9
2019
Male, age 18, unknown
131.6
2586
Male, age 75, left hemisphere
115.6
1827
Male, age 72, unknown
111.8
2219
Male, age 76, both hemispheres
107.7
2666
Male, age 74, left hemisphere
99.9
1870
Female, age 42, unknown
93.8
2411
Female, age 72, unknown
93.4
1833
Male, age 53, unknown
91.3
1830
Male, age 51, unknown
88.2
2828
Female, age 72, unknown
86.0
Dorsal raphe nucleus nTPM: 84.9
2298
Female, age 72, unknown
98.2
1828
Male, age 53, unknown
85.7
2047
Male, age 72, unknown
83.2
2750
Male, age 76, both hemispheres
82.6
2016
Female, age 72, unknown
74.7
Inferior colliculus nTPM: 110.8
2849
Male, age 72, unknown
120.7
1848
Female, age 42, unknown
116.3
2097
Female, age 72, unknown
114.6
1890
Male, age 53, unknown
91.4
Median raphe nucleus nTPM: 85.5
2220
Male, age 76, midline
85.5
Periaquaductal grey, anterior nTPM: 106.6
2502
Female, age 75, unknown
112.7
1795
Male, age 51, unknown
104.4
1947
Male, age 18, unknown
102.6
Periaquaductal grey, dorsal nTPM: 97.1
1840
Male, age 53, unknown
121.4
2464
Female, age 72, unknown
99.3
2850
Male, age 76, both hemispheres
86.2
1831
Male, age 72, unknown
81.6
Periaquaductal grey, lateral nTPM: 84.3
2272
Male, age 74, both hemispheres
89.6
2140
Male, age 76, both hemispheres
83.7
2053
Male, age 18, unknown
79.7
Pretectal area nTPM: 125.6
1816
Male, age 51, unknown
174.7
1944
Female, age 72, unknown
170.2
1817
Female, age 42, unknown
168.2
2007
Male, age 72, unknown
161.2
1815
Male, age 53, unknown
131.7
2667
Female, age 75, unknown
117.2
2224
Female, age 72, unknown
99.1
2407
Male, age 75, both hemispheres
96.8
2273
Male, age 74, both hemispheres
93.2
2825
Male, age 18, unknown
85.8
2316
Male, age 76, right hemisphere
84.0
Red nucleus nTPM: 77.7
2785
Male, age 18, unknown
118.8
2584
Male, age 75, left hemisphere
93.3
2725
Female, age 75, unknown
91.8
1821
Female, age 72, unknown
82.6
2588
Male, age 74, left hemisphere
77.1
1954
Female, age 42, unknown
70.2
1865
Male, age 51, unknown
69.7
2503
Female, age 72, unknown
69.1
2227
Male, age 72, unknown
68.2
2769
Male, age 72, unknown
67.9
1904
Male, age 53, unknown
61.9
2823
Male, age 76, right hemisphere
61.5
Substantia nigra nTPM: 114.9
1941
Male, age 53, unknown
151.5
1889
Female, age 72, unknown
143.4
2241
Male, age 72, unknown
132.9
2665
Male, age 74, both hemispheres
118.9
2409
Female, age 72, unknown
114.9
1916
Female, age 42, unknown
110.4
1851
Male, age 51, unknown
104.4
2583
Male, age 75, right hemisphere
102.3
2590
Female, age 75, unknown
92.6
2699
Male, age 18, unknown
77.5
Superior colliculus nTPM: 108.3
2087
Female, age 72, unknown
145.0
1895
Male, age 76, right hemisphere
119.8
2261
Male, age 18, unknown
118.6
1796
Male, age 53, unknown
112.3
1839
Male, age 51, unknown
110.8
2664
Male, age 75, both hemispheres
107.5
2668
Female, age 75, unknown
105.6
1913
Female, age 42, unknown
90.5
2587
Male, age 74, left hemisphere
89.0
1995
Male, age 72, unknown
84.2
Ventral tegmental area nTPM: 90.3
2223
Female, age 72, unknown
105.8
2410
Female, age 72, unknown
96.9
1915
Female, age 42, unknown
92.7
2218
Male, age 76, both hemispheres
88.8
1942
Male, age 51, unknown
82.7
2021
Male, age 53, unknown
74.8
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
43.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 43.7
Samples: 139
Max nTPM: 172.3
Min nTPM: 16.9
Std nTPM: 20.8
Median nTPM: 39.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
172.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
137.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
117.4
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
86.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
86.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
86.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
81.8
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
78.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
74.1
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
68.8
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
65.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
64.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
64.2
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
63.3
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
63.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
63.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
62.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
62.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
61.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
60.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
59.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
59.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
58.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
57.9
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
57.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
56.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
55.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
53.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
53.7
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
53.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
53.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
52.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
52.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
52.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
51.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
50.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
50.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
49.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
49.5
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
49.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
47.8
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
47.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
46.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
46.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
45.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
45.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
45.5
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
45.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
44.8
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
44.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
44.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
43.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
43.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
43.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
43.1
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
43.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
42.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
42.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
42.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
41.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
41.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
41.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
40.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
40.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
40.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
40.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
40.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
39.9
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
39.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
39.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
39.2
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
38.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
37.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
37.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
36.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
36.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
36.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
36.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
36.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
36.0
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
35.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
35.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
35.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
35.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
35.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
35.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
35.0
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
34.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
33.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
33.1
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
32.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
32.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
32.4
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
32.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
32.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
32.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
32.0
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
32.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
31.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
31.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
31.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
31.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
31.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
31.1
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
31.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
30.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
30.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
30.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
30.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
29.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
29.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
29.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
28.6
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
28.5
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
28.2
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
27.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
27.6
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
27.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
27.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
27.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
27.1
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
26.8
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
26.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
26.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
25.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
25.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
25.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
25.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
25.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
25.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
25.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
25.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
24.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
22.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
22.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
20.8
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
20.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
19.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
16.9
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
345.4
Mouse sample
Sample description
nTPM
Midbrain nTPM: 345.4
Samples: 4
Max nTPM: 358.6
Min nTPM: 330.5
Sample A
Male
330.5
Sample B
Male
353.3
Sample C
Female
358.6
Sample D
Female
339.3
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.