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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
546.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 331.2
2301
Female, age 85, both hemispheres
498.0
2188
Female, age 91, both hemispheres
296.6
1984
Male, age 76, both hemispheres
275.7
2090
Male, age 80, both hemispheres
254.4
Dorsal cochlear nucleus nTPM: 311.2
2187
Female, age 91, both hemispheres
351.4
2058
Male, age 76, both hemispheres
335.9
2802
Male, age 74, right hemisphere
330.2
2370
Male, age 61, both hemispheres
284.4
2378
Male, age 80, both hemispheres
253.8
Dorsal tegmental nucleus nTPM: 311.5
2083
Male, age 80, both hemispheres
333.8
2358
Male, age 61, both hemispheres
310.6
2326
Male, age 74, both hemispheres
306.0
1936
Male, age 76, left hemisphere
295.8
Dorsolateral tegmental area nTPM: 313.1
2141
Male, age 76, both hemispheres
413.6
2751
Female, age 85, both hemispheres
373.3
2654
Male, age 80, both hemispheres
317.9
2360
Male, age 74, both hemispheres
256.8
2337
Male, age 61, both hemispheres
203.9
Kolliker-Fuse nucleus nTPM: 318.1
2793
Female, age 91, left hemisphere
380.6
2315
Male, age 76, right hemisphere
291.1
2163
Male, age 80, both hemispheres
282.6
Lateral lemniscal nuclei nTPM: 410.9
2036
Male, age 80, both hemispheres
439.5
2169
Male, age 76, both hemispheres
436.7
2453
Male, age 74, right hemisphere
423.0
2320
Female, age 91, left hemisphere
387.5
2746
Female, age 85, left hemisphere
367.7
Lateral parabrachial nucleus nTPM: 335.0
2139
Female, age 85, right hemisphere
400.7
2790
Male, age 61, both hemispheres
335.5
2013
Male, age 80, both hemispheres
322.0
2792
Male, age 76, both hemispheres
281.9
Lateral vestibular nucleus nTPM: 299.1
2311
Male, age 80, both hemispheres
310.1
2184
Male, age 76, both hemispheres
288.1
Locus coeruleus nTPM: 546.9
2720
Male, age 74, both hemispheres
630.7
2123
Female, age 91, both hemispheres
589.9
2014
Male, age 55, unknown
567.5
2317
Female, age 72, unknown
533.7
2788
Male, age 74, unknown
523.7
2162
Male, age 80, both hemispheres
513.5
1980
Male, age 76, both hemispheres
469.5
Medial parabrachial nucleus nTPM: 338.4
2170
Female, age 91, both hemispheres
392.1
2854
Male, age 80, both hemispheres
386.5
2786
Male, age 76, both hemispheres
337.1
2156
Male, age 61, both hemispheres
301.8
2463
Female, age 85, right hemisphere
274.7
Medial periolivary nuclei nTPM: 385.7
2171
Female, age 85, both hemispheres
517.8
2063
Male, age 76, both hemispheres
418.3
2791
Male, age 74, right hemisphere
385.2
2458
Female, age 91, both hemispheres
329.0
2081
Male, age 80, both hemispheres
278.1
Motor facial nucleus nTPM: 424.8
2327
Male, age 80, both hemispheres
505.7
2697
Female, age 85, both hemispheres
483.7
2365
Male, age 74, right hemisphere
433.5
2062
Male, age 76, both hemispheres
427.6
2795
Female, age 91, both hemispheres
352.6
2126
Male, age 61, both hemispheres
345.5
Motor trigeminal nucleus nTPM: 369.0
2560
Male, age 74, both hemispheres
388.6
2321
Female, age 91, both hemispheres
378.4
2335
Male, age 61, both hemispheres
374.6
2079
Male, age 80, both hemispheres
363.8
2309
Male, age 76, both hemispheres
339.4
Nuclei of the trapezoid body nTPM: 436.6
2159
Male, age 61, both hemispheres
544.1
2735
Female, age 85, both hemispheres
510.8
1983
Male, age 76, both hemispheres
405.9
2166
Male, age 80, both hemispheres
364.8
2368
Female, age 91, both hemispheres
357.1
Nucleus raphe magnus nTPM: 463.4
2172
Female, age 85, both hemispheres
598.4
2160
Male, age 61, both hemispheres
595.1
2455
Male, age 74, both hemispheres
431.2
2328
Male, age 80, both hemispheres
429.0
2459
Female, age 91, both hemispheres
377.5
2051
Male, age 76, both hemispheres
349.3
Paramedian reticular nucleus nTPM: 415.2
2313
Male, age 61, both hemispheres
582.8
2050
Female, age 85, both hemispheres
469.7
2057
Male, age 80, both hemispheres
344.9
2052
Male, age 76, both hemispheres
263.4
Pedunculopontine tegmental nucleus nTPM: 377.0
2334
Male, age 80, both hemispheres
434.2
1921
Female, age 85, both hemispheres
395.1
2338
Male, age 61, both hemispheres
301.7
Pontine nuclei nTPM: 412.3
2787
Female, age 85, both hemispheres
546.8
1863
Male, age 55, unknown
458.4
2727
Male, age 61, right hemisphere
457.3
2454
Male, age 74, left hemisphere
413.7
2109
Female, age 72, unknown
397.0
1968
Male, age 76, left hemisphere
383.1
2319
Female, age 91, both hemispheres
346.8
2115
Male, age 80, left hemisphere
295.4
Pontine raphe nucleus nTPM: 493.1
2853
Male, age 76, midline
507.7
2122
Female, age 85, midline
478.5
Posteroventral cochlear nucleus nTPM: 277.7
2752
Female, age 85, both hemispheres
362.5
2070
Male, age 76, both hemispheres
341.2
2371
Male, age 61, both hemispheres
258.1
2135
Female, age 91, both hemispheres
231.8
2341
Male, age 80, both hemispheres
194.8
Principal sensory trigeminal nucleus nTPM: 392.5
2158
Male, age 61, both hemispheres
531.0
2367
Female, age 91, left hemisphere
361.5
2008
Male, age 80, left hemisphere
353.6
2324
Male, age 76, both hemispheres
323.7
Reticular pontine nucleus, caudal nTPM: 379.9
2332
Male, age 80, right hemisphere
518.1
2092
Male, age 76, both hemispheres
360.8
2559
Male, age 74, both hemispheres
326.4
2457
Female, age 91, both hemispheres
314.2
Reticular pontine nucleus, oral nTPM: 393.7
2167
Male, age 76, both hemispheres
417.5
2361
Male, age 74, both hemispheres
411.2
2012
Female, age 85, both hemispheres
405.3
1939
Male, age 80, both hemispheres
386.3
2366
Female, age 91, both hemispheres
348.2
Reticulotegmental nucleus nTPM: 422.5
2325
Male, age 76, both hemispheres
478.9
2333
Male, age 80, both hemispheres
410.4
2322
Female, age 91, both hemispheres
400.9
2452
Male, age 74, both hemispheres
400.0
Spinal trigeminal nucleus, oral nTPM: 306.2
1978
Male, age 76, both hemispheres
315.5
2737
Female, age 85, both hemispheres
310.6
2164
Male, age 80, both hemispheres
292.4
Subcoeruleus area nTPM: 396.6
2323
Female, age 91, left hemisphere
541.9
1958
Male, age 80, both hemispheres
392.8
2089
Male, age 76, left hemisphere
361.6
2451
Male, age 74, both hemispheres
346.1
2369
Female, age 85, left hemisphere
340.8
Superior olive nTPM: 406.5
1875
Female, age 85, both hemispheres
485.7
2329
Male, age 80, right hemisphere
444.5
2364
Male, age 74, right hemisphere
415.9
2561
Female, age 91, both hemispheres
355.0
2020
Male, age 76, both hemispheres
331.7
Ventral periolivary nuclei nTPM: 409.3
2130
Female, age 85, both hemispheres
514.0
2165
Male, age 80, both hemispheres
432.1
2794
Female, age 91, left hemisphere
370.4
2023
Male, age 76, both hemispheres
320.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 394.2
2359
Male, age 61, both hemispheres
428.3
2449
Male, age 74, both hemispheres
424.0
2840
Female, age 85, both hemispheres
420.2
1959
Male, age 76, both hemispheres
390.8
2161
Male, age 80, both hemispheres
372.0
2456
Female, age 91, both hemispheres
329.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
536.0
Pig sample
Sample description
nTPM
Pons nTPM: 536.0
Samples: 4
Max nTPM: 868.6
Min nTPM: 365.3
Sample A
Female
868.6
Sample B
Female
365.3
Sample C
Male
417.9
Sample D
Male
492.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
