HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:290.3 nTPM
HPA Brain:95.3 nTPM
GTEx:290.3 nTPM
FANTOM5:104.3 Scaled Tags Per Million
Pig:207.5 nTPM
Mouse:300.6 nTPM
Allen mouse:5.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017430
Glial cells Low
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 95.3
Sample id Sample description nTPM
Hippocampus
nTPM: 92.8
2621 Female, age 67, right hemisphere 105.5
2529 Female, age 94, left hemisphere 104.3
1898 Male, age 80, left hemisphere 102.0
1855 Male, age 76, left hemisphere 89.5
1911 Female, age 85, right hemisphere 80.9
2148 Female, age 91, left hemisphere 74.5
Dentate gyrus
nTPM: 89.4
2530 Female, age 94, left hemisphere 129.6
2010 Male, age 76, both hemispheres 98.8
2246 Female, age 85, both hemispheres 81.1
2531 Female, age 67, both hemispheres 77.7
2528 Male, age 74, both hemispheres 76.5
1927 Female, age 91, both hemispheres 72.7
Entorhinal gyrus
nTPM: 87.1
2117 Female, age 91, right hemisphere 100.5
2764 Male, age 80, right hemisphere 96.5
1787 Male, age 76, left hemisphere 87.4
1938 Female, age 85, left hemisphere 84.7
2686 Male, age 75, right hemisphere 77.9
2613 Female, age 94, left hemisphere 75.6
Hippocampus, CA1
nTPM: 84.8
2749 Male, age 80, left hemisphere 106.9
2527 Male, age 74, both hemispheres 83.9
1873 Female, age 85, both hemispheres 78.8
2082 Female, age 91, right hemisphere 78.0
2045 Male, age 76, both hemispheres 76.7
Hippocampus, CA2
nTPM: 89.8
1963 Male, age 80, left hemisphere 106.9
1892 Male, age 76, both hemispheres 96.3
2249 Male, age 74, both hemispheres 93.6
2437 Female, age 94, left hemisphere 92.1
1940 Female, age 85, left hemisphere 77.2
2113 Female, age 91, right hemisphere 72.4
Hippocampus, CA3
nTPM: 79.1
1867 Male, age 76, both hemispheres 99.5
1891 Female, age 85, both hemispheres 90.4
2137 Male, age 80, left hemisphere 78.9
2436 Male, age 74, both hemispheres 77.6
2620 Female, age 94, left hemisphere 66.7
2861 Female, age 67, both hemispheres 61.6
Parahippocampal cortex
nTPM: 76.5
2018 Male, age 76, both hemispheres 99.2
1850 Male, age 80, both hemispheres 92.4
2532 Female, age 72, left hemisphere 92.3
2245 Female, age 91, both hemispheres 77.0
1990 Female, age 91, right hemisphere 76.2
1933 Female, age 85, both hemispheres 74.5
2692 Male, age 74, both hemispheres 74.4
2250 Female, age 67, right hemisphere 63.0
2622 Female, age 67, right hemisphere 59.3
2693 Female, age 94, both hemispheres 57.0
Perirhinal gyrus
nTPM: 82.1
1794 Male, age 80, right hemisphere 103.0
1841 Female, age 85, right hemisphere 81.2
2848 Male, age 76, right hemisphere 78.9
1847 Female, age 91, left hemisphere 78.8
2521 Female, age 94, right hemisphere 68.5
Subiculum
nTPM: 95.3
1901 Male, age 80, both hemispheres 113.8
2042 Male, age 76, both hemispheres 111.0
1977 Female, age 85, both hemispheres 97.8
2438 Female, age 94, left hemisphere 95.3
2619 Male, age 74, both hemispheres 85.5
2729 Female, age 91, right hemisphere 68.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 290.3
GTEx sample id Sample description nTPM
239.2274.8323.1122.0433.8050100150200250300350400450500550600
Brain - Hippocampus
Average nTPM: 290.3
Samples: 197

Max nTPM: 620.8
Min nTPM: 122.0
Std nTPM: 79.5
Median nTPM: 274.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 620.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 562.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 535.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 509.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 499.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 472.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 467.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 459.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 433.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 428.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 427.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 104.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 104.3
FF:10169-103B7 60 years, female 120.4
FF:10153-102I9 76 years, female 88.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 207.5
Pig sample Sample description nTPM
163.1165.1181.6160.9166.3020406080100120140160180200220
 		Subiculum
nTPM: 179.6
Samples: 4

Max nTPM: 227.4
Min nTPM: 160.9
Sample A Female 227.4
Sample B Female 166.3
Sample C Male 160.9
Sample D Male 163.8
167.1210.8251.1136.0272.5020406080100120140160180200220240260
 		Dorsal hippocampus
nTPM: 207.5
Samples: 4

Max nTPM: 272.5
Min nTPM: 136.0
Sample A Female 272.5
Sample B Female 177.5
Sample C Male 244.0
Sample D Male 136.0
172.6193.8210.1148.5219.2020406080100120140160180200
 		Entorhinal cortex
nTPM: 188.9
Samples: 4

Max nTPM: 219.2
Min nTPM: 148.5
Sample A Female 180.6
Sample B Female 219.2
Sample C Male 207.1
Sample D Male 148.5
168.7182.8190.7145.6195.5020406080100120140160180
 		Ventral hippocampus
nTPM: 176.7
Samples: 4

Max nTPM: 195.5
Min nTPM: 145.6
Sample A Female 176.4
Sample B Female 145.6
Sample C Male 195.5
Sample D Male 189.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 300.6
Mouse sample Sample description nTPM
295.7305.4310.3278.0313.9020406080100120140160180200220240260280300
 		Entorhinal cortex
nTPM: 300.7
Samples: 4

Max nTPM: 313.9
Min nTPM: 278.0
Sample A Male 313.9
Sample B Male 309.1
Sample C Female 301.6
Sample D Female 278.0
278.4295.0311.2260.8327.4050100150200250300
 		Hippocampal formation
nTPM: 294.6
Samples: 4

Max nTPM: 327.4
Min nTPM: 260.8
Sample A Male 327.4
Sample B Male 260.8
Sample C Female 305.8
Sample D Female 284.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
686210 Antisense, RP_040916_01_B06, Mouse strain C57BL/6J (56 days, male) 5.7

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