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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
236.1
nTPM
HPA Brain:
56.3
nTPM
GTEx:
236.1
nTPM
FANTOM5:
369.8
Scaled Tags Per Million
Pig:
150.5
nTPM
Mouse:
522.2
nTPM
Allen mouse:
31.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
56.3
Sample id
Sample description
nTPM
Amygdala nTPM: 50.4
2814
Male, age 76, right hemisphere
91.0
1987
Female, age 91, left hemisphere
49.2
2695
Female, age 67, right hemisphere
43.4
2517
Female, age 94, left hemisphere
40.9
2514
Male, age 75, right hemisphere
27.3
Basal amygdala nTPM: 49.7
2110
Male, age 80, left hemisphere
63.8
1955
Male, age 76, both hemispheres
61.4
2243
Female, age 91, right hemisphere
57.7
2685
Female, age 94, left hemisphere
46.6
2827
Female, age 67, right hemisphere
37.4
2609
Male, age 75, right hemisphere
31.5
Central amygdala nTPM: 56.0
1905
Male, age 76, both hemispheres
75.5
2826
Female, age 94, left hemisphere
67.4
2701
Female, age 91, right hemisphere
48.9
2239
Male, age 80, left hemisphere
47.0
2515
Male, age 75, right hemisphere
41.0
Corticomedial amygdala nTPM: 56.3
2829
Male, age 80, left hemisphere
84.2
2240
Male, age 76, both hemispheres
72.0
2429
Female, age 94, left hemisphere
52.8
2242
Female, age 91, right hemisphere
49.0
2535
Female, age 67, right hemisphere
42.4
2428
Male, age 75, right hemisphere
37.3
Lateral amygdala nTPM: 38.0
1883
Male, age 76, both hemispheres
58.1
2256
Male, age 80, left hemisphere
43.7
2534
Female, age 94, left hemisphere
39.9
2255
Female, age 91, right hemisphere
33.7
2516
Male, age 75, right hemisphere
29.0
2830
Female, age 67, right hemisphere
23.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
236.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 236.1
Samples: 152
Max nTPM: 707.5
Min nTPM: 18.4
Std nTPM: 111.5
Median nTPM: 205.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
707.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
573.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
543.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
533.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
491.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
481.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
453.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
415.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
414.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
406.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
405.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
388.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
382.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
376.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
372.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
368.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
367.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
366.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
361.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
360.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
351.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
347.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
346.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
346.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
345.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
342.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
341.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
334.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
332.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
322.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
321.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
318.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
317.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
313.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
310.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
307.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
306.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
305.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
300.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
297.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
295.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
294.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
293.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
292.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
291.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
281.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
281.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
280.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
278.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
276.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
276.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
270.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
268.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
268.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
265.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
264.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
264.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
261.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
259.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
258.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
257.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
252.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
251.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
251.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
248.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
246.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
240.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
232.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
228.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
227.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
223.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
222.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
218.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
216.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
215.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
206.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
205.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
204.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
204.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
204.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
202.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
201.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
199.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
198.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
195.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
195.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
194.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
194.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
193.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
192.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
191.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
189.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
189.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
187.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
186.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
183.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
182.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
182.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
178.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
177.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
175.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
171.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
171.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
171.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
170.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
169.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
169.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
167.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
166.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
165.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
161.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
161.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
160.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
159.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
158.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
156.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
156.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
155.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
147.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
146.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
146.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
141.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
140.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
138.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
136.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
134.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
134.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
130.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
128.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
126.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
125.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
123.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
121.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
116.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
114.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
113.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
110.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
107.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
106.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
104.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
102.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
100.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
98.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
97.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
95.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
95.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
90.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
68.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
67.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
55.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
52.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
18.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
522.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 522.2
Samples: 4
Max nTPM: 557.5
Min nTPM: 487.4
Sample A
Male
557.5
Sample B
Male
530.0
Sample C
Female
513.8
Sample D
Female
487.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.