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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
306.3
nTPM
GTEx:
306.3
nTPM
FANTOM5:
190.3
Scaled Tags Per Million
Pig:
220.2
nTPM
Mouse:
645.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
306.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 306.3
Samples: 105
Max nTPM: 475.5
Min nTPM: 201.6
Std nTPM: 64.0
Median nTPM:
307_1
66 years, female
475.5
491_1
89 years, female
462.8
322_1
76 years, male
443.3
145_1
84 years, male
428.0
490_1
67 years, female
423.7
413_1
59 years, female
423.5
501_1
88 years, male
423.3
139_1
64 years, female
417.2
495_1
57 years, female
410.0
375_1
74 years, female
406.9
35_1
74 years, female
398.7
316_1
62 years, male
390.6
379_1
60 years, male
384.4
17_1
71 years, male
382.2
43_1
64 years, female
381.6
6_1
73 years, female
379.8
120_1
70 years, female
378.8
2_1
77 years, female
376.3
41_1
94 years, female
372.6
4_1
88 years, female
369.1
42_1
85 years, male
366.9
117_1
61 years, male
361.8
119_1
70 years, female
361.4
142_1
61 years, female
360.0
308_1
70 years, female
359.8
386_1
76 years, male
356.9
173_1
67 years, male
353.5
313_1
79 years, female
353.1
89_1
63 years, male
351.5
237_1
82 years, male
350.4
218_1
71 years, female
344.8
315_1
62 years, female
344.8
447_1
81 years, male
340.4
347_1
72 years, male
338.0
518_1
75 years, female
336.6
81_1
67 years, male
332.2
18_1
88 years, male
331.4
384_1
83 years, male
329.6
396_1
62 years, male
327.1
288_1
66 years, female
326.8
311_1
78 years, male
320.9
377_1
82 years, female
310.5
324_1
76 years, male
309.6
162_1
79 years, female
309.4
348_1
84 years, male
309.4
466_1
57 years, female
306.0
149_1
88 years, male
305.1
452_1
88 years, female
304.3
265_1
87 years, male
302.5
414_1
84 years, female
300.7
314_1
67 years, male
297.9
153_1
70 years, female
297.1
109_1
81 years, female
295.1
506_1
65 years, male
292.1
415_1
77 years, female
287.9
254_1
77 years, female
286.2
137_1
83 years, male
285.9
126_1
63 years, male
285.1
229_1
69 years, female
280.8
321_1
62 years, female
280.6
115_1
83 years, male
278.5
499_1
55 years, female
275.9
217_1
76 years, male
274.5
246_1
77 years, male
274.2
468_1
89 years, male
271.4
404_1
82 years, female
270.9
32_1
67 years, male
270.8
264_1
73 years, female
269.1
266_1
85 years, male
268.4
350_1
84 years, female
268.2
425_1
59 years, female
265.6
291_1
76 years, male
264.6
295_1
61 years, female
264.1
353_1
82 years, female
264.1
317_1
60 years, male
262.3
526_1
61 years, male
261.1
243_1
75 years, male
261.0
319_1
81 years, male
258.5
318_1
68 years, male
257.3
9_1
66 years, female
255.0
480_1
63 years, male
251.8
320_1
89 years, female
251.4
376_1
75 years, female
249.1
99_1
64 years, male
248.8
335_1
73 years, female
245.8
405_1
91 years, male
245.6
286_1
68 years, female
243.7
189_1
76 years, male
243.2
354_1
81 years, female
242.3
517_1
88 years, male
238.4
351_1
91 years, male
237.1
406_1
79 years, male
235.6
503_1
68 years, male
233.7
389_1
86 years, female
230.3
177_1
74 years, male
228.1
355_1
70 years, female
227.1
293_1
68 years, female
227.0
251_1
78 years, male
225.3
292_1
71 years, male
222.8
352_1
62 years, male
220.9
172_1
72 years, female
218.9
349_1
83 years, male
214.0
163_1
78 years, male
213.7
394_1
75 years, female
211.2
356_1
87 years, female
201.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.