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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
91.3
nTPM
HPA Brain:
1.3
nTPM
GTEx:
91.3
nTPM
FANTOM5:
307.3
Scaled Tags Per Million
Pig:
7.7
nTPM
Mouse:
0.0
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1.3
Sample id
Sample description
nTPM
Amygdala nTPM: 1.3
1987
Female, age 91, left hemisphere
1.9
2514
Male, age 75, right hemisphere
1.2
2517
Female, age 94, left hemisphere
1.2
2814
Male, age 76, right hemisphere
1.2
2695
Female, age 67, right hemisphere
0.9
Basal amygdala nTPM: 1.1
2110
Male, age 80, left hemisphere
1.6
2243
Female, age 91, right hemisphere
1.5
2609
Male, age 75, right hemisphere
1.1
2827
Female, age 67, right hemisphere
1.1
2685
Female, age 94, left hemisphere
1.0
1955
Male, age 76, both hemispheres
0.6
Central amygdala nTPM: 1.1
2239
Male, age 80, left hemisphere
1.6
2701
Female, age 91, right hemisphere
1.3
2515
Male, age 75, right hemisphere
1.1
2826
Female, age 94, left hemisphere
1.0
1905
Male, age 76, both hemispheres
0.8
Corticomedial amygdala nTPM: 1.2
2242
Female, age 91, right hemisphere
1.7
2829
Male, age 80, left hemisphere
1.4
2240
Male, age 76, both hemispheres
1.3
2428
Male, age 75, right hemisphere
1.1
2429
Female, age 94, left hemisphere
1.1
2535
Female, age 67, right hemisphere
0.9
Lateral amygdala nTPM: 1.3
2256
Male, age 80, left hemisphere
1.9
2830
Female, age 67, right hemisphere
1.5
2255
Female, age 91, right hemisphere
1.4
2516
Male, age 75, right hemisphere
1.0
2534
Female, age 94, left hemisphere
1.0
1883
Male, age 76, both hemispheres
0.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
91.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 91.3
Samples: 152
Max nTPM: 615.8
Min nTPM: 5.4
Std nTPM: 91.9
Median nTPM: 58.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
615.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
433.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
379.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
327.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
325.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
317.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
305.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
293.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
278.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
265.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
258.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
252.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
249.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
199.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
193.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
190.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
190.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
189.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
184.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
179.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
176.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
170.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
166.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
164.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
161.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
154.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
153.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
141.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
140.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
137.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
137.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
134.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
131.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
129.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
126.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
121.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
112.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
112.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
111.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
111.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
108.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
108.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
105.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
105.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
104.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
103.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
100.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
100.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
99.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
95.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
94.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
94.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
92.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
91.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
90.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
88.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
87.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
83.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
79.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
74.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
74.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
73.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
72.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
72.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
72.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
70.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
70.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
65.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
64.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
64.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
63.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
63.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
60.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
59.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
59.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
59.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
58.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
58.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
58.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
58.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
57.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
57.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
56.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
54.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
54.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
52.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
52.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
51.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
51.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
51.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
48.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
48.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
47.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
47.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
46.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
46.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
46.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
45.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
45.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
44.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
43.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
39.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
37.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
37.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
36.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
36.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
36.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
35.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
34.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
34.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
33.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
33.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
32.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
32.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
31.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
31.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
30.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
27.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
27.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
27.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
26.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
26.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
26.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
25.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
25.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
25.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
25.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
24.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
24.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
24.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
22.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
21.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
21.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
18.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
15.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
15.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
15.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
14.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
14.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
14.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
14.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
13.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
12.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
12.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
12.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
11.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
10.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
10.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
7.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
7.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
6.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
5.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
0.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 0.0
Samples: 4
Max nTPM: 0.0
Min nTPM: 0.0
Sample A
Male
0.0
Sample B
Male
0.0
Sample C
Female
0.0
Sample D
Female
0.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.