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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
233.9
nTPM
GTEx:
233.9
nTPM
FANTOM5:
595.8
Scaled Tags Per Million
Mouse:
756.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
233.9
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 233.9
Samples: 105
Max nTPM: 452.0
Min nTPM: 113.8
Std nTPM: 55.9
Median nTPM:
413_1
59 years, female
452.0
491_1
89 years, female
406.0
501_1
88 years, male
380.1
414_1
84 years, female
375.6
149_1
88 years, male
346.4
466_1
57 years, female
337.7
109_1
81 years, female
335.2
415_1
77 years, female
325.2
162_1
79 years, female
321.9
490_1
67 years, female
304.5
81_1
67 years, male
302.7
324_1
76 years, male
300.0
32_1
67 years, male
298.0
120_1
70 years, female
297.5
142_1
61 years, female
296.4
315_1
62 years, female
290.2
89_1
63 years, male
286.1
18_1
88 years, male
282.5
119_1
70 years, female
278.7
177_1
74 years, male
271.5
117_1
61 years, male
269.5
126_1
63 years, male
269.4
115_1
83 years, male
266.9
9_1
66 years, female
261.1
254_1
77 years, female
258.2
265_1
87 years, male
257.9
468_1
89 years, male
257.3
229_1
69 years, female
255.1
314_1
67 years, male
252.4
145_1
84 years, male
251.8
452_1
88 years, female
251.2
288_1
66 years, female
247.4
526_1
61 years, male
245.7
404_1
82 years, female
245.2
499_1
55 years, female
244.3
518_1
75 years, female
244.3
313_1
79 years, female
242.9
43_1
64 years, female
242.5
506_1
65 years, male
240.4
99_1
64 years, male
239.7
139_1
64 years, female
238.6
173_1
67 years, male
237.8
317_1
60 years, male
237.7
480_1
63 years, male
237.4
266_1
85 years, male
236.3
42_1
85 years, male
236.1
396_1
62 years, male
235.8
17_1
71 years, male
231.7
189_1
76 years, male
230.4
425_1
59 years, female
229.0
41_1
94 years, female
225.3
292_1
71 years, male
223.6
503_1
68 years, male
223.6
517_1
88 years, male
223.5
308_1
70 years, female
223.3
347_1
72 years, male
221.6
495_1
57 years, female
221.5
4_1
88 years, female
219.8
291_1
76 years, male
219.6
137_1
83 years, male
216.5
376_1
75 years, female
213.6
243_1
75 years, male
213.5
349_1
83 years, male
212.2
335_1
73 years, female
211.1
348_1
84 years, male
209.3
405_1
91 years, male
209.3
251_1
78 years, male
208.1
2_1
77 years, female
206.7
246_1
77 years, male
206.5
35_1
74 years, female
206.1
153_1
70 years, female
205.2
379_1
60 years, male
203.8
350_1
84 years, female
202.8
311_1
78 years, male
198.4
295_1
61 years, female
198.1
406_1
79 years, male
197.9
351_1
91 years, male
194.3
316_1
62 years, male
194.0
307_1
66 years, female
193.3
355_1
70 years, female
192.5
353_1
82 years, female
191.7
377_1
82 years, female
190.2
264_1
73 years, female
188.7
386_1
76 years, male
187.9
293_1
68 years, female
187.2
375_1
74 years, female
185.4
389_1
86 years, female
184.6
318_1
68 years, male
184.3
384_1
83 years, male
184.3
163_1
78 years, male
183.7
394_1
75 years, female
183.3
286_1
68 years, female
183.2
217_1
76 years, male
183.1
321_1
62 years, female
181.2
172_1
72 years, female
180.3
447_1
81 years, male
176.5
320_1
89 years, female
176.4
6_1
73 years, female
175.0
319_1
81 years, male
174.7
352_1
62 years, male
172.0
322_1
76 years, male
164.2
354_1
81 years, female
152.0
237_1
82 years, male
150.3
356_1
87 years, female
149.7
218_1
71 years, female
113.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.