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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
28.3
nTPM
HPA Brain:
37.0
nTPM
GTEx:
28.3
nTPM
FANTOM5:
15.3
Scaled Tags Per Million
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
37.0
Sample id
Sample description
nTPM
Amygdala nTPM: 24.3
1987
Female, age 91, left hemisphere
31.3
2814
Male, age 76, right hemisphere
30.7
2517
Female, age 94, left hemisphere
26.1
2514
Male, age 75, right hemisphere
18.1
2695
Female, age 67, right hemisphere
15.5
Basal amygdala nTPM: 34.1
2243
Female, age 91, right hemisphere
49.1
2685
Female, age 94, left hemisphere
37.7
2827
Female, age 67, right hemisphere
35.8
2110
Male, age 80, left hemisphere
28.6
1955
Male, age 76, both hemispheres
28.5
2609
Male, age 75, right hemisphere
25.2
Central amygdala nTPM: 37.0
2826
Female, age 94, left hemisphere
45.9
2701
Female, age 91, right hemisphere
43.2
2239
Male, age 80, left hemisphere
37.2
1905
Male, age 76, both hemispheres
29.8
2515
Male, age 75, right hemisphere
28.6
Corticomedial amygdala nTPM: 33.3
2829
Male, age 80, left hemisphere
39.8
2242
Female, age 91, right hemisphere
38.7
2535
Female, age 67, right hemisphere
36.0
2429
Female, age 94, left hemisphere
33.0
2240
Male, age 76, both hemispheres
27.1
2428
Male, age 75, right hemisphere
25.2
Lateral amygdala nTPM: 32.0
2534
Female, age 94, left hemisphere
49.2
2255
Female, age 91, right hemisphere
35.9
2830
Female, age 67, right hemisphere
30.4
1883
Male, age 76, both hemispheres
29.7
2256
Male, age 80, left hemisphere
28.6
2516
Male, age 75, right hemisphere
18.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
28.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 28.3
Samples: 152
Max nTPM: 68.0
Min nTPM: 1.3
Std nTPM: 13.6
Median nTPM: 26.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
68.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
67.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
60.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
58.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
56.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
53.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
52.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
51.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
51.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
50.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
49.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
49.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
48.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
47.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
47.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
46.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
45.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
45.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
44.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
42.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
41.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
41.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
41.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
41.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
41.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
41.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
41.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
40.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
40.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
40.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
40.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
40.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
40.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
39.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
38.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
38.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
37.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
37.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
37.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
37.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
37.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
37.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
37.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
37.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
36.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
36.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
36.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
35.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
35.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
35.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
34.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
34.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
34.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
34.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
33.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
32.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
32.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
32.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
32.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
32.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
32.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
32.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
32.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
32.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
31.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
31.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
31.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
30.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
30.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
30.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
29.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
29.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
29.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
28.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
28.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
27.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
26.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
26.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
25.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
25.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
24.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
24.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
24.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
24.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
24.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
23.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
23.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
23.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
23.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
22.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
22.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
22.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
22.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
22.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
21.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
21.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
20.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
20.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
20.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
20.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
20.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
19.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
19.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
19.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
19.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
18.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
18.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
18.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
18.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
18.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
18.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
17.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
17.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
17.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
17.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
17.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
17.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
16.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
16.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
16.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
15.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
15.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
15.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
15.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
14.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
14.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
14.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
14.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
14.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
14.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
14.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
13.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
13.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
13.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
12.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
12.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
12.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
11.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
11.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
10.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
10.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
9.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
9.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
8.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
8.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
8.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
8.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
8.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
5.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
4.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
2.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
1.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.