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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
127.5
nTPM
GTEx:
127.5
nTPM
FANTOM5:
529.8
Scaled Tags Per Million
Pig:
0.0
nTPM
Mouse:
0.0
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
127.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 127.5
Samples: 105
Max nTPM: 890.5
Min nTPM: 7.1
Std nTPM: 128.3
Median nTPM:
384_1
83 years, male
890.5
308_1
70 years, female
541.5
2_1
77 years, female
530.5
321_1
62 years, female
429.2
375_1
74 years, female
365.1
41_1
94 years, female
323.3
480_1
63 years, male
322.2
42_1
85 years, male
319.1
322_1
76 years, male
306.7
4_1
88 years, female
278.1
447_1
81 years, male
274.5
173_1
67 years, male
271.7
313_1
79 years, female
259.1
237_1
82 years, male
251.7
218_1
71 years, female
221.4
406_1
79 years, male
215.3
389_1
86 years, female
208.6
348_1
84 years, male
192.2
17_1
71 years, male
191.6
117_1
61 years, male
188.4
317_1
60 years, male
187.7
307_1
66 years, female
185.5
495_1
57 years, female
182.1
119_1
70 years, female
174.8
316_1
62 years, male
163.5
353_1
82 years, female
163.5
319_1
81 years, male
162.4
320_1
89 years, female
161.5
293_1
68 years, female
160.8
452_1
88 years, female
154.6
350_1
84 years, female
148.3
139_1
64 years, female
141.0
145_1
84 years, male
139.1
6_1
73 years, female
138.4
349_1
83 years, male
127.7
311_1
78 years, male
127.5
491_1
89 years, female
124.6
347_1
72 years, male
123.8
137_1
83 years, male
122.1
351_1
91 years, male
119.3
89_1
63 years, male
118.8
162_1
79 years, female
116.7
120_1
70 years, female
115.3
526_1
61 years, male
114.2
315_1
62 years, female
112.6
295_1
61 years, female
111.8
354_1
81 years, female
104.5
324_1
76 years, male
102.3
291_1
76 years, male
101.2
506_1
65 years, male
100.6
396_1
62 years, male
99.9
153_1
70 years, female
96.6
251_1
78 years, male
90.5
501_1
88 years, male
89.6
376_1
75 years, female
88.5
490_1
67 years, female
88.1
99_1
64 years, male
77.2
43_1
64 years, female
72.8
35_1
74 years, female
72.1
264_1
73 years, female
72.0
126_1
63 years, male
68.9
217_1
76 years, male
68.9
292_1
71 years, male
66.6
266_1
85 years, male
65.8
265_1
87 years, male
65.4
9_1
66 years, female
59.9
377_1
82 years, female
59.5
286_1
68 years, female
58.2
288_1
66 years, female
57.7
355_1
70 years, female
57.5
386_1
76 years, male
57.5
414_1
84 years, female
55.8
405_1
91 years, male
52.0
142_1
61 years, female
47.6
172_1
72 years, female
47.6
314_1
67 years, male
45.8
394_1
75 years, female
45.5
254_1
77 years, female
45.3
379_1
60 years, male
45.3
189_1
76 years, male
44.2
356_1
87 years, female
44.2
518_1
75 years, female
44.1
415_1
77 years, female
40.6
81_1
67 years, male
39.4
499_1
55 years, female
38.7
18_1
88 years, male
36.9
318_1
68 years, male
36.9
177_1
74 years, male
36.8
404_1
82 years, female
36.1
229_1
69 years, female
32.7
115_1
83 years, male
32.0
109_1
81 years, female
31.7
466_1
57 years, female
30.9
413_1
59 years, female
27.6
243_1
75 years, male
27.2
32_1
67 years, male
26.5
517_1
88 years, male
24.6
163_1
78 years, male
24.0
352_1
62 years, male
23.0
425_1
59 years, female
22.3
149_1
88 years, male
20.8
468_1
89 years, male
20.6
335_1
73 years, female
19.5
503_1
68 years, male
15.2
246_1
77 years, male
7.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.