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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
167.5
nTPM
GTEx:
167.5
nTPM
FANTOM5:
159.5
Scaled Tags Per Million
Pig:
224.3
nTPM
Mouse:
435.2
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
167.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 167.5
Samples: 105
Max nTPM: 334.5
Min nTPM: 32.4
Std nTPM: 62.2
Median nTPM:
218_1
71 years, female
334.5
386_1
76 years, male
288.8
350_1
84 years, female
275.2
172_1
72 years, female
273.9
447_1
81 years, male
267.9
349_1
83 years, male
262.2
319_1
81 years, male
257.6
243_1
75 years, male
257.4
237_1
82 years, male
256.3
347_1
72 years, male
255.2
335_1
73 years, female
253.3
425_1
59 years, female
253.1
352_1
62 years, male
250.3
356_1
87 years, female
247.8
379_1
60 years, male
235.3
316_1
62 years, male
233.3
163_1
78 years, male
232.1
177_1
74 years, male
230.7
375_1
74 years, female
230.0
292_1
71 years, male
229.3
354_1
81 years, female
225.8
6_1
73 years, female
222.8
293_1
68 years, female
215.6
355_1
70 years, female
214.9
317_1
60 years, male
214.6
321_1
62 years, female
211.0
353_1
82 years, female
209.7
404_1
82 years, female
209.1
318_1
68 years, male
208.9
322_1
76 years, male
205.3
384_1
83 years, male
201.3
286_1
68 years, female
201.2
377_1
82 years, female
199.7
376_1
75 years, female
197.3
406_1
79 years, male
196.5
173_1
67 years, male
195.4
189_1
76 years, male
194.9
389_1
86 years, female
194.2
394_1
75 years, female
184.2
229_1
69 years, female
184.1
145_1
84 years, male
183.8
506_1
65 years, male
183.6
251_1
78 years, male
183.2
351_1
91 years, male
182.9
526_1
61 years, male
181.6
503_1
68 years, male
178.6
348_1
84 years, male
178.1
480_1
63 years, male
178.0
291_1
76 years, male
177.8
405_1
91 years, male
176.2
295_1
61 years, female
171.9
9_1
66 years, female
170.1
115_1
83 years, male
169.8
126_1
63 years, male
166.2
320_1
89 years, female
166.2
266_1
85 years, male
165.0
311_1
78 years, male
164.3
246_1
77 years, male
162.3
307_1
66 years, female
160.4
452_1
88 years, female
160.3
264_1
73 years, female
159.8
265_1
87 years, male
158.5
468_1
89 years, male
157.9
153_1
70 years, female
156.8
517_1
88 years, male
156.7
4_1
88 years, female
152.5
324_1
76 years, male
151.6
518_1
75 years, female
149.0
396_1
62 years, male
146.6
18_1
88 years, male
142.7
254_1
77 years, female
142.0
137_1
83 years, male
139.7
499_1
55 years, female
138.2
41_1
94 years, female
135.1
217_1
76 years, male
131.4
42_1
85 years, male
126.1
35_1
74 years, female
121.3
314_1
67 years, male
120.4
117_1
61 years, male
117.7
313_1
79 years, female
116.9
99_1
64 years, male
115.0
120_1
70 years, female
114.6
315_1
62 years, female
108.4
17_1
71 years, male
108.0
2_1
77 years, female
105.7
162_1
79 years, female
105.3
81_1
67 years, male
104.0
288_1
66 years, female
103.0
109_1
81 years, female
100.2
119_1
70 years, female
94.4
142_1
61 years, female
94.2
43_1
64 years, female
91.4
139_1
64 years, female
91.3
415_1
77 years, female
89.8
32_1
67 years, male
86.2
466_1
57 years, female
79.4
308_1
70 years, female
68.7
495_1
57 years, female
68.5
501_1
88 years, male
66.0
414_1
84 years, female
65.9
89_1
63 years, male
61.7
149_1
88 years, male
55.0
490_1
67 years, female
51.5
413_1
59 years, female
40.7
491_1
89 years, female
32.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.