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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
146.1
nTPM
HPA Brain:
160.9
nTPM
GTEx:
146.1
nTPM
FANTOM5:
70.5
Scaled Tags Per Million
Pig:
20.1
nTPM
Mouse:
30.4
nTPM
Allen mouse:
3.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
160.9
Sample id
Sample description
nTPM
Amygdala nTPM: 105.0
2695
Female, age 67, right hemisphere
159.9
2814
Male, age 76, right hemisphere
117.9
2517
Female, age 94, left hemisphere
100.0
2514
Male, age 75, right hemisphere
77.6
1987
Female, age 91, left hemisphere
69.6
Basal amygdala nTPM: 96.3
2827
Female, age 67, right hemisphere
213.7
2609
Male, age 75, right hemisphere
98.2
2110
Male, age 80, left hemisphere
73.1
1955
Male, age 76, both hemispheres
70.5
2685
Female, age 94, left hemisphere
69.8
2243
Female, age 91, right hemisphere
52.2
Central amygdala nTPM: 124.7
2826
Female, age 94, left hemisphere
259.0
2515
Male, age 75, right hemisphere
137.9
1905
Male, age 76, both hemispheres
113.3
2239
Male, age 80, left hemisphere
68.0
2701
Female, age 91, right hemisphere
45.4
Corticomedial amygdala nTPM: 70.6
2535
Female, age 67, right hemisphere
115.0
2428
Male, age 75, right hemisphere
110.6
2829
Male, age 80, left hemisphere
59.2
2429
Female, age 94, left hemisphere
56.9
2242
Female, age 91, right hemisphere
41.0
2240
Male, age 76, both hemispheres
40.6
Lateral amygdala nTPM: 160.9
2830
Female, age 67, right hemisphere
397.7
2534
Female, age 94, left hemisphere
166.2
2516
Male, age 75, right hemisphere
135.1
1883
Male, age 76, both hemispheres
97.7
2255
Female, age 91, right hemisphere
86.8
2256
Male, age 80, left hemisphere
81.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
146.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 146.1
Samples: 152
Max nTPM: 1008.2
Min nTPM: 16.3
Std nTPM: 135.5
Median nTPM: 105.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
1008.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
808.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
797.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
566.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
411.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
385.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
376.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
340.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
337.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
296.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
288.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
269.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
266.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
265.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
250.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
249.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
247.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
242.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
240.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
240.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
235.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
230.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
230.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
227.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
220.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
219.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
218.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
217.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
214.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
212.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
211.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
199.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
193.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
191.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
188.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
186.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
186.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
185.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
183.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
182.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
182.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
181.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
179.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
175.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
170.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
166.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
160.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
159.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
158.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
154.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
154.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
152.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
151.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
149.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
144.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
143.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
142.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
142.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
141.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
140.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
136.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
134.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
131.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
129.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
129.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
127.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
126.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
124.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
123.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
120.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
116.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
111.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
110.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
107.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
106.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
105.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
105.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
104.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
103.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
103.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
99.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
98.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
97.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
95.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
94.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
94.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
93.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
93.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
91.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
88.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
88.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
86.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
86.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
86.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
85.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
85.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
83.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
80.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
79.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
77.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
77.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
77.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
76.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
76.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
76.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
75.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
75.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
74.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
74.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
72.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
72.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
71.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
70.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
70.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
69.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
68.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
67.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
66.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
64.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
63.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
60.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
59.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
58.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
57.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
56.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
56.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
56.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
55.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
54.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
53.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
53.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
52.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
52.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
51.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
50.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
50.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
48.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
46.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
43.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
42.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
42.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
40.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
40.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
37.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
35.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
34.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
32.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
32.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
31.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
24.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
24.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
16.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
30.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 30.4
Samples: 4
Max nTPM: 36.5
Min nTPM: 26.5
Sample A
Male
28.1
Sample B
Male
26.5
Sample C
Female
36.5
Sample D
Female
30.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.