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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
221.5
nTPM
HPA Brain:
401.1
nTPM
GTEx:
221.5
nTPM
FANTOM5:
189.5
Scaled Tags Per Million
Pig:
127.9
nTPM
Mouse:
82.4
nTPM
Allen mouse:
1.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
401.1
Sample id
Sample description
nTPM
Amygdala nTPM: 322.1
2695
Female, age 67, right hemisphere
476.1
2814
Male, age 76, right hemisphere
328.0
2514
Male, age 75, right hemisphere
300.8
2517
Female, age 94, left hemisphere
281.8
1987
Female, age 91, left hemisphere
223.6
Basal amygdala nTPM: 306.4
2827
Female, age 67, right hemisphere
558.6
2685
Female, age 94, left hemisphere
301.5
2609
Male, age 75, right hemisphere
274.3
2110
Male, age 80, left hemisphere
272.0
1955
Male, age 76, both hemispheres
243.1
2243
Female, age 91, right hemisphere
188.8
Central amygdala nTPM: 338.6
2826
Female, age 94, left hemisphere
627.7
2515
Male, age 75, right hemisphere
311.7
2239
Male, age 80, left hemisphere
268.2
1905
Male, age 76, both hemispheres
249.4
2701
Female, age 91, right hemisphere
235.9
Corticomedial amygdala nTPM: 247.0
2535
Female, age 67, right hemisphere
316.7
2428
Male, age 75, right hemisphere
267.3
2240
Male, age 76, both hemispheres
260.3
2429
Female, age 94, left hemisphere
233.1
2829
Male, age 80, left hemisphere
231.2
2242
Female, age 91, right hemisphere
173.2
Lateral amygdala nTPM: 401.1
2830
Female, age 67, right hemisphere
773.6
2516
Male, age 75, right hemisphere
455.4
2534
Female, age 94, left hemisphere
388.3
2256
Male, age 80, left hemisphere
332.3
2255
Female, age 91, right hemisphere
231.2
1883
Male, age 76, both hemispheres
226.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
221.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 221.5
Samples: 152
Max nTPM: 666.3
Min nTPM: 77.9
Std nTPM: 120.9
Median nTPM: 174.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
666.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
563.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
532.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
525.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
523.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
500.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
484.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
480.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
471.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
471.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
455.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
452.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
448.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
434.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
408.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
407.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
406.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
397.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
378.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
377.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
372.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
356.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
340.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
337.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
334.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
331.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
329.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
329.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
325.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
323.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
298.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
297.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
297.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
296.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
296.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
295.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
293.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
290.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
288.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
282.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
281.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
279.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
278.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
276.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
272.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
268.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
257.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
255.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
247.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
247.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
238.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
238.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
237.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
232.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
231.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
224.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
224.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
222.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
217.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
216.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
216.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
214.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
214.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
214.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
210.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
201.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
199.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
196.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
195.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
195.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
191.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
190.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
184.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
180.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
179.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
174.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
174.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
172.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
171.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
171.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
169.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
164.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
161.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
160.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
157.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
156.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
153.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
152.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
152.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
148.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
148.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
148.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
146.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
146.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
145.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
145.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
145.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
145.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
145.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
142.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
142.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
141.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
140.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
140.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
139.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
137.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
136.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
136.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
136.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
132.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
132.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
131.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
131.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
129.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
129.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
129.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
125.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
125.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
125.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
124.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
122.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
121.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
120.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
120.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
119.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
119.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
118.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
116.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
116.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
114.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
113.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
113.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
113.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
111.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
110.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
110.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
110.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
110.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
109.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
108.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
106.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
105.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
104.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
104.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
103.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
98.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
96.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
95.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
95.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
93.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
88.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
77.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
82.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 82.4
Samples: 4
Max nTPM: 86.1
Min nTPM: 80.2
Sample A
Male
80.2
Sample B
Male
81.9
Sample C
Female
86.1
Sample D
Female
81.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.