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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
373.3
nTPM
GTEx:
373.3
nTPM
FANTOM5:
920.0
Scaled Tags Per Million
Pig:
454.8
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
373.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 373.3
Samples: 105
Max nTPM: 643.8
Min nTPM: 162.4
Std nTPM: 83.1
Median nTPM:
501_1
88 years, male
643.8
142_1
61 years, female
615.6
17_1
71 years, male
567.3
413_1
59 years, female
563.4
506_1
65 years, male
540.9
35_1
74 years, female
536.8
315_1
62 years, female
535.5
119_1
70 years, female
520.4
42_1
85 years, male
481.6
313_1
79 years, female
481.4
139_1
64 years, female
472.6
18_1
88 years, male
462.5
145_1
84 years, male
459.7
120_1
70 years, female
455.6
295_1
61 years, female
454.8
288_1
66 years, female
452.2
153_1
70 years, female
445.8
379_1
60 years, male
444.5
137_1
83 years, male
440.2
237_1
82 years, male
438.1
4_1
88 years, female
437.3
173_1
67 years, male
427.8
264_1
73 years, female
427.2
414_1
84 years, female
427.1
376_1
75 years, female
424.6
229_1
69 years, female
421.2
316_1
62 years, male
417.0
404_1
82 years, female
413.6
2_1
77 years, female
410.4
6_1
73 years, female
407.9
321_1
62 years, female
406.3
452_1
88 years, female
405.8
109_1
81 years, female
405.0
126_1
63 years, male
404.9
41_1
94 years, female
400.0
265_1
87 years, male
396.3
43_1
64 years, female
395.8
89_1
63 years, male
395.4
117_1
61 years, male
394.1
324_1
76 years, male
393.5
377_1
82 years, female
386.2
319_1
81 years, male
385.2
466_1
57 years, female
382.5
266_1
85 years, male
381.5
350_1
84 years, female
377.7
314_1
67 years, male
371.9
375_1
74 years, female
371.6
394_1
75 years, female
371.4
406_1
79 years, male
368.4
177_1
74 years, male
367.7
149_1
88 years, male
360.7
99_1
64 years, male
360.3
246_1
77 years, male
359.4
317_1
60 years, male
359.4
384_1
83 years, male
359.4
499_1
55 years, female
359.3
243_1
75 years, male
357.5
396_1
62 years, male
355.2
254_1
77 years, female
354.3
115_1
83 years, male
353.7
322_1
76 years, male
352.9
32_1
67 years, male
348.5
348_1
84 years, male
346.7
286_1
68 years, female
346.2
526_1
61 years, male
346.0
491_1
89 years, female
343.3
405_1
91 years, male
340.8
335_1
73 years, female
337.6
386_1
76 years, male
336.4
425_1
59 years, female
334.7
468_1
89 years, male
330.8
9_1
66 years, female
330.5
307_1
66 years, female
330.5
81_1
67 years, male
330.0
320_1
89 years, female
327.1
490_1
67 years, female
326.9
356_1
87 years, female
326.7
318_1
68 years, male
325.3
503_1
68 years, male
321.5
351_1
91 years, male
320.8
480_1
63 years, male
311.8
415_1
77 years, female
309.9
218_1
71 years, female
308.0
163_1
78 years, male
303.3
308_1
70 years, female
303.0
352_1
62 years, male
296.2
311_1
78 years, male
296.1
355_1
70 years, female
295.7
292_1
71 years, male
295.1
517_1
88 years, male
293.5
291_1
76 years, male
291.7
217_1
76 years, male
290.9
172_1
72 years, female
289.4
495_1
57 years, female
284.7
162_1
79 years, female
283.4
447_1
81 years, male
282.9
347_1
72 years, male
282.7
349_1
83 years, male
279.9
189_1
76 years, male
272.4
353_1
82 years, female
269.8
293_1
68 years, female
268.6
518_1
75 years, female
256.3
389_1
86 years, female
225.4
251_1
78 years, male
174.9
354_1
81 years, female
162.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.