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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
76.6
nTPM
HPA Brain:
215.2
nTPM
GTEx:
76.6
nTPM
FANTOM5:
74.5
Scaled Tags Per Million
Pig:
113.9
nTPM
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
215.2
Sample id
Sample description
nTPM
Hippocampus nTPM: 58.0
2148
Female, age 91, left hemisphere
94.6
1898
Male, age 80, left hemisphere
69.4
2529
Female, age 94, left hemisphere
52.3
1911
Female, age 85, right hemisphere
49.4
2621
Female, age 67, right hemisphere
47.1
1855
Male, age 76, left hemisphere
35.4
Dentate gyrus nTPM: 71.8
1927
Female, age 91, both hemispheres
110.4
2531
Female, age 67, both hemispheres
109.0
2528
Male, age 74, both hemispheres
81.9
2246
Female, age 85, both hemispheres
50.3
2530
Female, age 94, left hemisphere
47.5
2010
Male, age 76, both hemispheres
31.7
Entorhinal gyrus nTPM: 39.2
1787
Male, age 76, left hemisphere
55.0
1938
Female, age 85, left hemisphere
39.7
2764
Male, age 80, right hemisphere
38.7
2686
Male, age 75, right hemisphere
36.1
2117
Female, age 91, right hemisphere
35.8
2613
Female, age 94, left hemisphere
29.9
Hippocampus, CA1 nTPM: 54.4
2045
Male, age 76, both hemispheres
111.8
2527
Male, age 74, both hemispheres
48.4
2749
Male, age 80, left hemisphere
46.3
1873
Female, age 85, both hemispheres
37.8
2082
Female, age 91, right hemisphere
27.7
Hippocampus, CA2 nTPM: 61.5
2249
Male, age 74, both hemispheres
146.7
1892
Male, age 76, both hemispheres
97.6
2437
Female, age 94, left hemisphere
61.8
1940
Female, age 85, left hemisphere
27.0
1963
Male, age 80, left hemisphere
18.8
2113
Female, age 91, right hemisphere
17.1
Hippocampus, CA3 nTPM: 215.2
2436
Male, age 74, both hemispheres
768.0
2620
Female, age 94, left hemisphere
246.6
1867
Male, age 76, both hemispheres
120.0
1891
Female, age 85, both hemispheres
68.6
2861
Female, age 67, both hemispheres
64.1
2137
Male, age 80, left hemisphere
24.1
Parahippocampal cortex nTPM: 39.0
1990
Female, age 91, right hemisphere
67.0
1933
Female, age 85, both hemispheres
52.6
1850
Male, age 80, both hemispheres
51.5
2250
Female, age 67, right hemisphere
39.6
2622
Female, age 67, right hemisphere
38.9
2692
Male, age 74, both hemispheres
33.9
2245
Female, age 91, both hemispheres
33.8
2693
Female, age 94, both hemispheres
26.6
2532
Female, age 72, left hemisphere
25.2
2018
Male, age 76, both hemispheres
21.0
Perirhinal gyrus nTPM: 44.7
1847
Female, age 91, left hemisphere
90.8
1794
Male, age 80, right hemisphere
47.0
2521
Female, age 94, right hemisphere
38.2
1841
Female, age 85, right hemisphere
23.8
2848
Male, age 76, right hemisphere
23.8
Subiculum nTPM: 66.5
2438
Female, age 94, left hemisphere
121.1
1901
Male, age 80, both hemispheres
83.1
1977
Female, age 85, both hemispheres
62.7
2619
Male, age 74, both hemispheres
58.0
2729
Female, age 91, right hemisphere
56.9
2042
Male, age 76, both hemispheres
17.1
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
76.6
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 76.6
Samples: 197
Max nTPM: 623.8
Min nTPM: 8.7
Std nTPM: 91.2
Median nTPM: 43.9
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
623.8
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
585.9
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
412.8
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
405.3
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
364.9
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
351.0
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
340.3
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
298.6
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
293.4
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
264.0
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
231.9
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
217.8
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
206.4
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
203.0
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
201.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
196.1
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
196.0
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
187.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
178.4
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
173.2
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
171.7
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
167.5
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
162.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
155.3
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
155.1
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
149.7
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
136.0
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
130.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
130.1
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
126.4
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
123.6
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
117.9
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
116.2
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
115.7
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
114.3
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
113.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
110.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
108.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
105.6
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
103.7
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
101.4
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
100.8
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
100.1
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
99.4
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
98.0
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
94.5
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
93.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
92.3
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
92.1
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
90.7
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
90.1
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
88.9
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
78.4
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
78.3
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
78.0
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
76.0
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
73.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
72.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
72.4
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
72.4
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
70.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
70.0
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
68.4
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
68.1
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
67.8
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
67.7
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
67.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
67.1
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
65.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
64.3
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
63.8
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
63.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
63.4
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
62.4
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
61.6
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
61.4
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
59.2
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
58.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
57.9
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
57.4
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
56.9
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
56.9
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
56.1
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
53.8
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
53.4
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
53.1
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
52.1
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
51.5
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
50.5
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
49.3
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
48.4
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
48.1
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
46.7
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
46.5
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
46.3
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
45.1
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
45.0
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
44.0
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
43.9
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
43.8
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
43.6
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
43.5
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
43.4
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
43.2
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
43.1
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
42.6
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
42.5
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
42.2
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
42.2
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
41.2
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
40.4
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
39.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
39.0
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
38.6
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
38.5
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
38.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
38.0
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
37.9
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
37.8
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
37.7
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
37.2
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
36.2
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
35.2
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
35.1
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
34.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
32.1
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
32.0
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
30.5
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
30.2
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
30.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
29.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
29.9
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
29.2
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
29.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
28.8
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
28.8
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
28.7
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
28.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
28.3
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
28.2
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
28.1
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
27.3
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
27.3
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
27.0
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
26.8
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
26.6
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
26.3
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
26.3
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
25.6
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
25.4
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
25.3
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
25.0
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
24.4
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
24.4
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
23.7
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
23.4
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
23.2
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
22.9
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
22.6
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
22.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
21.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
21.7
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
21.2
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
21.2
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
20.9
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
19.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
19.5
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
19.0
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
18.4
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
18.3
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
18.3
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
18.3
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
18.0
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
17.5
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
17.4
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
17.3
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
17.2
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
16.8
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
16.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
16.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
14.9
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
14.8
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
14.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
13.9
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
13.4
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
13.2
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
13.2
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
12.9
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
12.9
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
12.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
12.7
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
12.0
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
11.7
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
11.0
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
10.9
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
10.4
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
8.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.