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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
129.5
nTPM
HPA Brain:
106.2
nTPM
GTEx:
129.5
nTPM
FANTOM5:
161.5
Scaled Tags Per Million
Mouse:
86.7
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
106.2
Sample id
Sample description
nTPM
Amygdala nTPM: 106.2
2695
Female, age 67, right hemisphere
161.5
2814
Male, age 76, right hemisphere
104.6
2514
Male, age 75, right hemisphere
99.8
1987
Female, age 91, left hemisphere
84.0
2517
Female, age 94, left hemisphere
81.2
Basal amygdala nTPM: 97.2
2609
Male, age 75, right hemisphere
178.9
2243
Female, age 91, right hemisphere
95.2
2110
Male, age 80, left hemisphere
94.0
1955
Male, age 76, both hemispheres
80.0
2685
Female, age 94, left hemisphere
67.5
2827
Female, age 67, right hemisphere
67.5
Central amygdala nTPM: 98.9
2515
Male, age 75, right hemisphere
116.7
2239
Male, age 80, left hemisphere
111.0
1905
Male, age 76, both hemispheres
105.9
2701
Female, age 91, right hemisphere
82.8
2826
Female, age 94, left hemisphere
78.0
Corticomedial amygdala nTPM: 90.8
2428
Male, age 75, right hemisphere
135.3
2829
Male, age 80, left hemisphere
111.8
2242
Female, age 91, right hemisphere
81.2
2429
Female, age 94, left hemisphere
76.7
2240
Male, age 76, both hemispheres
74.1
2535
Female, age 67, right hemisphere
65.5
Lateral amygdala nTPM: 102.3
2516
Male, age 75, right hemisphere
160.9
2256
Male, age 80, left hemisphere
121.0
2255
Female, age 91, right hemisphere
93.6
2830
Female, age 67, right hemisphere
88.5
1883
Male, age 76, both hemispheres
84.6
2534
Female, age 94, left hemisphere
65.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
129.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 129.5
Samples: 152
Max nTPM: 339.3
Min nTPM: 3.1
Std nTPM: 57.8
Median nTPM: 127.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
339.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
298.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
278.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
273.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
258.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
250.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
245.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
241.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
237.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
235.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
235.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
233.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
215.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
215.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
212.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
208.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
204.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
204.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
193.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
191.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
189.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
188.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
185.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
179.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
178.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
174.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
173.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
171.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
171.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
170.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
166.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
166.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
163.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
161.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
159.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
157.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
157.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
157.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
155.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
155.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
155.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
152.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
151.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
149.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
148.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
148.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
148.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
146.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
146.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
145.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
145.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
144.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
144.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
143.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
143.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
141.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
141.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
140.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
140.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
139.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
139.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
138.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
136.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
136.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
136.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
136.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
135.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
133.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
133.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
132.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
132.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
131.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
129.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
128.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
128.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
127.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
127.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
125.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
121.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
119.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
119.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
117.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
116.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
116.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
115.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
114.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
112.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
110.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
110.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
110.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
109.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
108.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
108.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
107.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
107.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
106.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
105.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
104.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
104.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
104.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
104.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
102.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
102.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
101.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
99.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
97.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
97.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
97.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
94.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
94.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
94.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
93.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
92.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
87.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
86.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
86.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
86.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
85.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
84.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
84.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
81.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
80.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
77.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
77.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
74.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
74.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
74.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
73.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
73.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
72.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
67.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
67.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
66.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
66.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
64.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
63.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
63.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
61.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
60.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
60.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
60.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
58.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
55.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
54.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
50.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
46.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
45.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
44.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
36.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
20.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
17.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
3.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
86.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 86.7
Samples: 4
Max nTPM: 97.4
Min nTPM: 80.9
Sample A
Male
80.9
Sample B
Male
86.2
Sample C
Female
97.4
Sample D
Female
82.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.