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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OGFOD3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
35.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
33.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
30.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
29.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
26.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
25.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
25.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
24.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
24.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
24.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
23.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
22.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
22.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
21.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
21.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
20.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
20.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
19.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
19.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
19.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
18.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
18.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
18.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
17.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
17.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
17.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
17.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
17.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
17.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
17.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
16.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
16.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
15.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
15.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
15.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
15.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
15.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
15.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
14.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
14.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
14.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
13.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
13.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
12.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
12.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
12.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
12.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
12.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
11.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
11.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
10.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
10.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
10.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
9.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
9.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
9.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
6.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OGFOD3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
37.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
34.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
34.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
33.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
31.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
28.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
27.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
27.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
27.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
26.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
26.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
26.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
26.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
26.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
26.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
25.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
25.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
25.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
25.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
25.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
24.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
24.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
24.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
24.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
24.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
24.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
23.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
23.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
23.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
23.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
23.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
23.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
23.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
23.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
23.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
23.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
23.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
22.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
22.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
22.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
22.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
22.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
22.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
22.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
22.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
22.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
22.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
22.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
22.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
21.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
21.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
21.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
21.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
21.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
21.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
21.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
21.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
20.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
20.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
20.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
20.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
20.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
20.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
20.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
20.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
20.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
19.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
19.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
19.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
19.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
19.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
19.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
19.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
19.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
19.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
19.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
19.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
19.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
19.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
18.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
18.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
18.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
18.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
18.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
18.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
18.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
18.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
18.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
18.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
18.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
18.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
18.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
18.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
18.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
18.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
18.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
18.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
18.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
18.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
18.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
18.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
18.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
18.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
18.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
18.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
18.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
18.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
18.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
18.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
17.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
17.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
17.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
17.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
17.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
17.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
17.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
17.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
17.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
17.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
17.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
17.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
17.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
17.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
17.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
17.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
17.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
17.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
17.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
17.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
17.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
17.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
17.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
17.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
17.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
17.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
17.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
17.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
17.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
17.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
17.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
17.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
17.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
17.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
17.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
17.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
16.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
16.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
16.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
16.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
16.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
16.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
16.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
16.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
16.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
16.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
16.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
16.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
16.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
16.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
16.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
16.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
16.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
16.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
16.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
16.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
16.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
16.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
16.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
16.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
16.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
16.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
16.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
16.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
16.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
16.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
16.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
16.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
16.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
16.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
16.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
16.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
16.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
16.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
16.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
16.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
15.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
15.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
15.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
15.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
15.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
15.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
15.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
15.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
15.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
15.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
15.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
15.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
15.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
15.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
15.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
15.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
15.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
15.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
15.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
15.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
15.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
15.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
15.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
15.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
15.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
15.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
15.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
15.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
15.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
15.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
15.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
15.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
15.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
15.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
15.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
15.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
15.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
15.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
15.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
15.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
15.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
15.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
14.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
14.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
14.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
14.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
14.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
14.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
14.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
14.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
14.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
14.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
14.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
14.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
14.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
14.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
14.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
14.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
14.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
14.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
14.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
14.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
14.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
14.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
14.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
14.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
14.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
14.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
14.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
14.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
14.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
14.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
14.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
14.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
14.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
14.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
14.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
14.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
14.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
14.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
14.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
14.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
14.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
14.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
14.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
14.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
14.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
14.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
14.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
14.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
14.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
14.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
13.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
13.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
13.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
13.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
13.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
13.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
13.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
13.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
13.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
13.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
13.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
13.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
13.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
13.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
13.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
13.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
13.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
13.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
13.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
13.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
13.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
13.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
13.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
13.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
13.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
13.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
13.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
13.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
13.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
13.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
13.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
13.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
13.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
13.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
13.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
12.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
12.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
12.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
12.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
12.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
12.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
12.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
12.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
12.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
12.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
12.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
12.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
12.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
12.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
12.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
12.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
12.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
12.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
12.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
12.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
12.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
12.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
12.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
12.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
12.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
12.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
11.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
11.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
11.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
11.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
11.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
11.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
11.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
11.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
11.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
11.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
11.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
11.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
11.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
11.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
11.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
11.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
11.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
11.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
11.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
11.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
10.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
10.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
10.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
10.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
10.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
10.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
10.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
10.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
10.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
10.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
10.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
10.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
10.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
10.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
10.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
10.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
10.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
10.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
10.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
9.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
9.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
9.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
9.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
9.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
9.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
8.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
8.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
7.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
6.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
6.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
6.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
1.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OGFOD3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
31.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
30.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
28.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
26.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
26.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
25.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
25.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
24.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
23.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
23.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
23.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
22.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
22.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
21.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
21.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
21.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
21.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
20.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
20.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
20.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
20.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
18.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
18.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
17.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
17.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
17.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
17.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
17.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
17.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
16.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
16.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
16.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
16.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
16.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
16.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
16.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
15.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
15.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
15.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
15.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
15.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
14.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
14.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
14.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
14.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
14.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
14.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
14.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
14.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
13.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
13.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
13.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
12.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
12.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
12.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
12.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
12.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
11.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
11.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
11.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
10.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
10.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
10.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
10.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
10.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
10.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
10.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
10.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
9.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
9.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
9.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
9.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
9.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
9.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
8.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
8.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
7.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OGFOD3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
115.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
71.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
56.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
53.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
52.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
50.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
49.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
49.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
49.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
47.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
46.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
43.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
43.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
42.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
42.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
41.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
40.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
40.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
40.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
40.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
39.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
38.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
38.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
37.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
37.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
37.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
37.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
36.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
36.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
36.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
36.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
36.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
36.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
35.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
35.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
35.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
35.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
35.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
35.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
35.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
35.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
34.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
34.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
34.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
34.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
34.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
34.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
34.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
34.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
34.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
33.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
33.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
33.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
33.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
33.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
33.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
32.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
32.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
32.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
32.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
32.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
32.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
32.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
32.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
32.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
32.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
31.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
30.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
30.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
30.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
30.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
30.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
30.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
30.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
30.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
30.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
30.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
30.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
29.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
29.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
29.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
29.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
29.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
29.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
29.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
29.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
29.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
29.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
28.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
28.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
28.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
28.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
28.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
28.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
28.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
28.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
28.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
28.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
27.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
27.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
27.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
27.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
27.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
27.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
27.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
27.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
27.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
27.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
27.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
27.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
27.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
26.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
26.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
26.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
26.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
26.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
26.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
26.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
25.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
25.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
25.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
25.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
25.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
25.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
25.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
25.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
25.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
25.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
25.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
24.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
24.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
24.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
24.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
24.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
24.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
24.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
24.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
24.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
24.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
23.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
23.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
23.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
23.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
23.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
23.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
23.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
23.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
23.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
23.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
23.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
23.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
23.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
22.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
22.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
22.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
22.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
22.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
22.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
22.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
22.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
22.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
21.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
21.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
21.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
21.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
21.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
21.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
21.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
21.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
21.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
21.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
21.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
21.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
20.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
20.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
20.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
20.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
20.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
20.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
20.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
20.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
20.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
20.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
20.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
20.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
20.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
20.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
20.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
20.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
20.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
19.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
19.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
19.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
19.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
19.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
19.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
19.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
19.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
19.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
19.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
19.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
18.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
18.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
18.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
18.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
18.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
18.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
18.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
18.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
18.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
18.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
17.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
17.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
17.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
17.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
16.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
16.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
16.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
16.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
16.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
16.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
16.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
16.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
16.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
16.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
15.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
15.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
15.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
15.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
15.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
14.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
13.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
13.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
13.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
13.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
12.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
12.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
12.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
12.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
11.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
11.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
11.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
10.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
9.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
9.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
9.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
9.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
9.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
8.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
8.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
8.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
8.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
8.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
6.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
6.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
5.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
3.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
2.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
1.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001260009
Tumor
1.1
CPT0078800003
Tumor
1.0
CPT0079480003
Tumor
0.9
CPT0076330003
Tumor
0.9
CPT0092190003
Normal
0.8
CPT0012280003
Tumor
0.8
CPT0020120003
Tumor
0.7
CPT0063630003
Tumor
0.7
CPT0012180003
Tumor
0.7
CPT0017850003
Tumor
0.6
CPT0087040003
Tumor
0.6
CPT0092160003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0015730003
Tumor
0.5
CPT0025230003
Tumor
0.5
CPT0069000003
Tumor
0.4
CPT0086950003
Tumor
0.4
CPT0023360001
Normal
0.4
CPT0077320001
Normal
0.4
CPT0084590001
Normal
0.4
CPT0025350003
Tumor
0.4
CPT0001270001
Normal
0.3
CPT0007320003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0069190001
Normal
0.3
CPT0065430003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0079430001
Normal
0.3
CPT0012550003
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0092740003
Normal
0.3
CPT0066470004
Tumor
0.3
CPT0066430001
Normal
0.3
CPT0092790003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0014130001
Normal
0.3
CPT0085670003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0086360003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0078840001
Normal
0.2
CPT0079380003
Tumor
0.2
CPT0081620001
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0078940001
Normal
0.2
CPT0000640003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0084560003
Tumor
0.2
CPT0075570001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0069160003
Tumor
0.2
CPT0000660001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0019990003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0088710001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0011410003
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0088900003
Tumor
0.2
CPT0087050003
Normal
0.2
CPT0026420001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0089480003
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0065450001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0086970003
Normal
0.1
CPT0081880003
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0025050003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0078660003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0079180003
Tumor
0.0
CPT0012770003
Normal
0.0
CPT0006950001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0088970003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0001190001
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0000870016
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0079230003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0071150004
Tumor
-0.2
CPT0012090003
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0009060003
Tumor
-0.2
CPT0012370003
Tumor
-0.2
CPT0082010001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0088760003
Tumor
-0.3
CPT0001540009
Tumor
-0.3
CPT0024680001
Normal
-0.3
CPT0065690003
Tumor
-0.3
CPT0026410003
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0014160003
Tumor
-0.3
CPT0078930003
Tumor
-0.3
CPT0010160003
Tumor
-0.4
CPT0086870003
Tumor
-0.4
CPT0066480003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0009080003
Normal
-0.4
CPT0077310003
Tumor
-0.5
CPT0086890003
Normal
-0.6
CPT0092290003
Tumor
-0.6
CPT0012920003
Normal
-0.6
CPT0014370004
Tumor
-0.6
CPT0078510003
Tumor
-0.9
CPT0006630003
Tumor
-1.0
CPT0021240003
Tumor
-1.2
CPT0017410003
Tumor
-1.2
CPT0012900004
Tumor
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
