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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
14.6
nTPM
HPA Brain:
18.8
nTPM
GTEx:
14.6
nTPM
FANTOM5:
56.2
Scaled Tags Per Million
Pig:
34.9
nTPM
Mouse:
30.7
nTPM
Allen mouse:
16.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
18.8
Sample id
Sample description
nTPM
Amygdala nTPM: 8.9
2517
Female, age 94, left hemisphere
16.6
1987
Female, age 91, left hemisphere
14.5
2514
Male, age 75, right hemisphere
9.4
2695
Female, age 67, right hemisphere
2.5
2814
Male, age 76, right hemisphere
1.4
Basal amygdala nTPM: 15.2
2685
Female, age 94, left hemisphere
23.4
2827
Female, age 67, right hemisphere
21.4
2243
Female, age 91, right hemisphere
19.3
2609
Male, age 75, right hemisphere
10.2
2110
Male, age 80, left hemisphere
9.5
1955
Male, age 76, both hemispheres
7.4
Central amygdala nTPM: 5.9
2239
Male, age 80, left hemisphere
13.2
2826
Female, age 94, left hemisphere
11.7
2515
Male, age 75, right hemisphere
3.1
2701
Female, age 91, right hemisphere
0.8
1905
Male, age 76, both hemispheres
0.4
Corticomedial amygdala nTPM: 18.8
2535
Female, age 67, right hemisphere
33.5
2829
Male, age 80, left hemisphere
24.4
2242
Female, age 91, right hemisphere
21.5
2429
Female, age 94, left hemisphere
18.1
2240
Male, age 76, both hemispheres
8.3
2428
Male, age 75, right hemisphere
6.8
Lateral amygdala nTPM: 5.4
2534
Female, age 94, left hemisphere
9.2
2830
Female, age 67, right hemisphere
8.9
2256
Male, age 80, left hemisphere
5.5
2516
Male, age 75, right hemisphere
4.3
2255
Female, age 91, right hemisphere
3.0
1883
Male, age 76, both hemispheres
1.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
14.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 14.6
Samples: 152
Max nTPM: 86.4
Min nTPM: 1.2
Std nTPM: 13.5
Median nTPM: 10.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
86.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
67.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
65.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
49.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
47.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
45.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
43.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
41.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
40.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
36.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
35.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
34.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
32.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
30.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
30.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
29.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
29.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
29.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
28.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
27.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
27.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
27.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
26.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
26.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
26.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
25.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
25.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
24.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
23.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
22.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
22.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
20.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
20.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
20.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
20.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
20.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
19.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
19.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
19.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
18.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
18.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
18.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
17.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
17.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
17.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
17.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
17.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
16.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
15.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
15.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
15.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
15.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
14.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
14.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
14.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
14.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
14.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
14.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
14.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
13.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
13.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
13.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
13.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
13.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
13.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
13.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
12.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
12.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
12.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
12.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
11.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
11.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
11.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
11.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
10.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
10.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
10.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
10.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
10.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
10.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
9.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
9.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
9.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
9.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
9.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
9.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
9.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
9.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
9.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
9.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
9.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
8.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
8.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
8.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
7.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
7.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
7.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
7.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
7.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
6.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
6.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
6.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
6.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
6.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
6.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
6.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
6.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
6.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
5.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
5.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
5.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
5.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
5.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
5.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
5.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
5.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
4.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
4.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
4.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
4.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
4.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
4.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
4.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
3.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
3.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
3.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
3.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
3.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
3.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
3.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
3.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
3.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
3.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
3.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
3.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
2.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
2.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
2.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
2.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
2.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
2.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
2.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
2.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
2.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
2.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
1.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
1.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
1.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
1.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
1.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
1.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
1.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
30.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 30.7
Samples: 4
Max nTPM: 35.0
Min nTPM: 21.3
Sample A
Male
35.0
Sample B
Male
33.3
Sample C
Female
21.3
Sample D
Female
33.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.