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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLEC is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
135.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
59.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
50.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
46.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
46.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
44.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
42.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
41.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
40.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
35.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
33.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
33.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
32.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
30.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
29.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
28.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
28.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
28.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
26.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
26.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
26.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
26.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
26.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
25.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
25.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
25.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
25.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
23.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
22.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
22.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
21.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
21.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
20.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
20.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
19.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
19.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
18.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
18.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
18.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
18.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
18.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
18.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
17.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
17.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
17.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
17.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
17.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
16.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
16.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
16.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
16.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
15.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
15.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
14.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
14.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
13.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
12.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
11.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
11.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
11.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
10.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLEC is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
134.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
131.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
129.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
101.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
100.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
92.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
86.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
85.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
85.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
78.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
77.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
77.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
76.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
76.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
75.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
74.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
72.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
70.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
69.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
68.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
64.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
63.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
63.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
63.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
63.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
62.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
61.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
61.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
60.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
60.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
60.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
59.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
59.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
59.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
58.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
58.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
58.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
58.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
57.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
56.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
56.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
55.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
55.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
55.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
55.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
55.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
55.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
54.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
54.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
54.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
53.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
53.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
53.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
52.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
52.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
52.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
52.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
51.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
51.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
51.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
51.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
50.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
50.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
50.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
50.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
50.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
50.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
49.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
49.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
49.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
48.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
48.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
48.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
48.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
48.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
48.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
47.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
47.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
47.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
47.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
47.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
47.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
47.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
47.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
47.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
47.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
46.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
46.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
46.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
46.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
46.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
46.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
46.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
45.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
45.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
45.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
45.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
45.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
45.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
45.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
45.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
45.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
45.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
45.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
44.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
44.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
44.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
44.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
43.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
43.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
43.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
43.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
43.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
42.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
42.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
42.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
42.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
42.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
42.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
42.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
42.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
41.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
41.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
41.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
41.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
41.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
41.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
41.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
41.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
41.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
40.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
40.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
40.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
40.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
40.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
40.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
40.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
40.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
40.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
40.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
40.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
40.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
40.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
40.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
39.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
39.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
39.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
39.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
39.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
39.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
39.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
39.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
38.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
38.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
38.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
38.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
38.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
38.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
38.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
38.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
38.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
38.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
38.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
38.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
38.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
38.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
37.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
37.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
37.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
37.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
37.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
37.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
37.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
37.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
37.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
37.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
37.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
37.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
36.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
36.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
36.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
36.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
36.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
36.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
36.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
36.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
36.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
36.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
36.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
36.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
36.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
35.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
35.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
35.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
35.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
35.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
35.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
35.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
35.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
35.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
34.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
34.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
34.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
34.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
34.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
34.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
34.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
34.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
34.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
34.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
34.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
34.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
33.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
33.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
33.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
33.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
33.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
33.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
33.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
33.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
33.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
33.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
33.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
33.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
33.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
33.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
32.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
32.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
32.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
32.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
32.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
32.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
32.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
32.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
32.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
32.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
32.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
32.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
32.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
32.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
32.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
31.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
31.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
31.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
31.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
31.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
31.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
31.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
31.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
31.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
31.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
31.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
31.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
31.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
31.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
31.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
31.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
31.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
31.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
31.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
30.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
30.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
30.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
30.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
30.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
30.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
30.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
30.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
30.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
30.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
30.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
30.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
30.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
30.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
30.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
30.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
30.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
29.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
29.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
29.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
29.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
29.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
29.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
29.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
29.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
29.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
29.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
29.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
28.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
28.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
28.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
28.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
28.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
28.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
28.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
28.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
28.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
28.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
28.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
28.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
28.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
28.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
28.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
28.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
28.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
28.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
28.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
28.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
28.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
28.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
28.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
27.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
27.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
27.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
27.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
27.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
27.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
27.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
27.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
27.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
27.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
27.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
27.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
27.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
27.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
27.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
27.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
27.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
27.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
26.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
26.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
26.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
26.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
26.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
26.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
26.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
26.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
26.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
26.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
26.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
26.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
26.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
25.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
25.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
25.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
25.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
25.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
25.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
25.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
25.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
25.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
25.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
25.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
25.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
25.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
25.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
25.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
25.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
25.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
25.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
25.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
25.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
24.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
24.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
24.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
24.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
24.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
24.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
24.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
24.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
23.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
23.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
23.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
23.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
23.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
23.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
23.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
23.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
23.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
23.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
23.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
23.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
23.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
23.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
23.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
23.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
23.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
23.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
23.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
23.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
23.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
22.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
22.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
22.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
22.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
22.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
22.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
22.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
22.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
22.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
22.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
22.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
22.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
22.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
22.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
21.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
21.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
21.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
21.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
21.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
21.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
21.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
21.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
20.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
20.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
20.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
20.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
20.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
20.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
19.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
19.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
19.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
19.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
19.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
19.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
19.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
19.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
19.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
19.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
19.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
19.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
19.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
19.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
18.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
18.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
18.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
18.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
18.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
17.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
17.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
17.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
17.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
17.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
17.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
17.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
17.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
16.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
16.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
16.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
16.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
16.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
16.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
16.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
16.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
15.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
15.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
15.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
15.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
15.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
15.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
15.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
15.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
14.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
14.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
14.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
14.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
13.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
13.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
13.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
13.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
13.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
13.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
13.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
12.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
12.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
11.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
10.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
9.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
9.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
8.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
7.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
7.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
6.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
6.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
1.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLEC is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
87.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
86.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
79.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
72.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
69.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
68.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
67.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
64.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
63.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
62.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
61.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
61.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
61.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
59.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
57.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
57.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
56.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
54.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
53.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
53.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
52.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
51.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
50.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
49.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
49.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
49.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
49.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
48.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
47.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
45.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
45.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
45.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
44.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
42.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
42.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
41.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
41.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
39.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
39.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
38.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
38.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
38.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
38.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
37.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
37.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
36.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
36.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
36.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
36.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
35.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
35.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
34.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
34.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
34.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
34.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
34.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
33.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
33.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
32.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
32.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
32.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
32.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
32.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
30.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
30.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
30.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
29.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
29.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
29.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
28.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
28.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
28.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
28.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
28.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
27.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
27.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
26.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
25.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
25.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
25.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
24.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
24.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
24.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
24.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
23.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
23.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
22.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
21.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
21.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
19.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
19.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
18.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
18.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
17.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
16.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
16.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
15.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
13.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLEC is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
147.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
142.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
139.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
128.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
123.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
109.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
105.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
91.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
90.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
86.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
86.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
81.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
78.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
77.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
76.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
75.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
74.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
74.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
72.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
71.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
71.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
71.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
70.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
67.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
66.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
65.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
64.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
64.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
64.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
63.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
63.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
63.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
62.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
61.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
60.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
60.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
58.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
58.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
58.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
58.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
57.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
57.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
57.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
56.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
56.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
56.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
54.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
54.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
53.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
52.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
52.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
51.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
51.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
50.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
50.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
50.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
49.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
49.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
49.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
49.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
49.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
48.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
48.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
47.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
46.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
46.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
46.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
45.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
45.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
44.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
44.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
44.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
43.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
43.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
42.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
41.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
41.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
41.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
41.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
40.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
40.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
40.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
40.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
39.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
39.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
39.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
38.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
38.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
38.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
38.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
38.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
38.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
38.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
37.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
37.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
37.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
37.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
37.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
36.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
36.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
36.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
36.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
36.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
36.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
36.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
35.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
35.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
34.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
34.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
34.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
34.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
34.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
34.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
34.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
34.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
33.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
33.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
33.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
33.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
33.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
33.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
33.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
33.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
33.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
32.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
32.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
32.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
32.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
32.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
32.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
32.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
32.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
32.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
32.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
31.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
31.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
31.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
31.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
31.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
31.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
31.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
31.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
30.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
30.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
30.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
30.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
30.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
30.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
29.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
29.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
29.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
29.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
29.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
29.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
29.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
29.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
29.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
28.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
28.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
28.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
28.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
28.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
28.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
28.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
28.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
28.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
27.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
27.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
27.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
27.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
27.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
27.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
27.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
27.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
27.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
26.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
26.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
26.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
26.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
26.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
26.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
26.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
25.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
25.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
25.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
25.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
25.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
25.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
25.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
25.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
25.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
25.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
25.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
24.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
24.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
24.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
24.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
24.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
24.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
24.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
23.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
23.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
23.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
23.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
23.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
23.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
22.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
22.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
22.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
22.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
22.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
22.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
22.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
21.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
21.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
21.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
21.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
21.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
20.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
20.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
20.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
20.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
19.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
19.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
19.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
19.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
19.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
19.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
18.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
18.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
18.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
18.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
18.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
18.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
18.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
17.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
17.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
17.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
17.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
17.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
17.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
16.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
16.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
16.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
15.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
15.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
15.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
15.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
15.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
14.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
14.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
14.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
14.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
14.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
14.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
13.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
13.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
13.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
12.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
12.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
12.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
12.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
11.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
10.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
10.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
10.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
10.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
8.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
1.2
CPT0001180009
Tumor
1.1
CPT0081880003
Tumor
1.0
CPT0001260009
Tumor
0.9
CPT0086950003
Tumor
0.9
CPT0069000003
Tumor
0.9
CPT0000640003
Tumor
0.8
CPT0092730003
Tumor
0.7
CPT0011240003
Tumor
0.7
CPT0078510003
Tumor
0.7
CPT0066480003
Tumor
0.7
CPT0075560003
Tumor
0.6
CPT0066470004
Tumor
0.6
CPT0025290003
Tumor
0.6
CPT0088900003
Tumor
0.6
CPT0069160003
Tumor
0.6
CPT0021240003
Tumor
0.5
CPT0006440003
Tumor
0.5
CPT0071150004
Tumor
0.5
CPT0088630003
Tumor
0.5
CPT0065690003
Tumor
0.5
CPT0024670003
Tumor
0.5
CPT0015910003
Tumor
0.5
CPT0012670003
Tumor
0.5
CPT0019990003
Tumor
0.5
CPT0086870003
Tumor
0.5
CPT0063630003
Tumor
0.5
CPT0015810003
Tumor
0.5
CPT0012370003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0078830003
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0023690003
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0075720003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0081990003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0086030003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0077320001
Normal
0.2
CPT0065810003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0079510001
Normal
0.2
CPT0012180003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0025110003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0025580004
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0026410003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0011410003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0087040003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0009060003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0001550001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0012290003
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0015730003
Tumor
-0.3
CPT0078530001
Normal
-0.3
CPT0009080003
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0018250001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0089040001
Normal
-0.3
CPT0023360001
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0081620001
Normal
-0.4
CPT0079180003
Tumor
-0.4
CPT0025610001
Normal
-0.4
CPT0079000001
Normal
-0.4
CPT0092310003
Normal
-0.4
CPT0012570003
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0078840001
Normal
-0.4
CPT0024680001
Normal
-0.4
CPT0082010001
Normal
-0.4
CPT0089480003
Normal
-0.4
CPT0020020001
Normal
-0.4
CPT0017450001
Normal
-0.4
CPT0026420001
Normal
-0.4
CPT0010170001
Normal
-0.4
CPT0000790001
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0065450001
Normal
-0.4
CPT0025920001
Normal
-0.4
CPT0023710001
Normal
-0.4
CPT0078670001
Normal
-0.5
CPT0006950001
Normal
-0.5
CPT0006730001
Normal
-0.5
CPT0066430001
Normal
-0.5
CPT0001340003
Tumor
-0.5
CPT0092740003
Normal
-0.5
CPT0001350001
Normal
-0.5
CPT0012770003
Normal
-0.5
CPT0087050003
Normal
-0.6
CPT0088780001
Normal
-0.6
CPT0078660003
Tumor
-0.6
CPT0088970003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
