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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
66.9
nTPM
HPA Brain:
83.5
nTPM
GTEx:
66.9
nTPM
FANTOM5:
136.9
Scaled Tags Per Million
Pig:
61.5
nTPM
Mouse:
102.1
nTPM
Allen mouse:
4.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
83.5
Sample id
Sample description
nTPM
Amygdala nTPM: 72.5
2514
Male, age 75, right hemisphere
80.4
2517
Female, age 94, left hemisphere
75.6
1987
Female, age 91, left hemisphere
73.5
2695
Female, age 67, right hemisphere
67.5
2814
Male, age 76, right hemisphere
65.2
Basal amygdala nTPM: 78.0
2110
Male, age 80, left hemisphere
98.5
2685
Female, age 94, left hemisphere
80.5
2243
Female, age 91, right hemisphere
77.5
2609
Male, age 75, right hemisphere
74.9
2827
Female, age 67, right hemisphere
71.5
1955
Male, age 76, both hemispheres
65.5
Central amygdala nTPM: 70.6
2826
Female, age 94, left hemisphere
78.7
2239
Male, age 80, left hemisphere
77.9
2515
Male, age 75, right hemisphere
72.6
2701
Female, age 91, right hemisphere
63.6
1905
Male, age 76, both hemispheres
60.2
Corticomedial amygdala nTPM: 83.5
2829
Male, age 80, left hemisphere
101.4
2242
Female, age 91, right hemisphere
99.1
2428
Male, age 75, right hemisphere
80.4
2429
Female, age 94, left hemisphere
79.8
2535
Female, age 67, right hemisphere
74.6
2240
Male, age 76, both hemispheres
65.6
Lateral amygdala nTPM: 71.5
2534
Female, age 94, left hemisphere
82.2
2830
Female, age 67, right hemisphere
73.2
2256
Male, age 80, left hemisphere
72.4
1883
Male, age 76, both hemispheres
69.6
2255
Female, age 91, right hemisphere
66.9
2516
Male, age 75, right hemisphere
64.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
66.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 66.9
Samples: 152
Max nTPM: 119.1
Min nTPM: 42.5
Std nTPM: 13.2
Median nTPM: 66.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
119.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
104.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
103.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
102.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
100.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
98.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
97.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
96.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
88.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
87.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
86.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
86.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
85.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
84.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
84.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
83.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
81.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
81.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
79.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
79.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
78.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
78.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
78.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
77.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
76.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
76.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
76.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
76.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
76.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
76.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
75.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
75.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
75.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
75.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
74.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
74.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
74.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
74.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
73.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
72.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
72.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
72.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
72.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
72.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
72.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
72.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
72.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
71.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
71.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
70.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
70.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
70.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
70.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
70.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
70.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
70.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
69.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
69.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
69.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
69.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
69.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
68.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
68.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
68.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
68.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
67.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
67.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
67.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
66.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
66.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
66.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
66.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
66.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
66.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
66.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
66.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
65.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
65.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
65.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
65.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
64.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
64.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
64.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
64.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
64.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
64.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
64.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
63.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
63.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
63.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
63.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
63.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
62.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
62.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
61.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
61.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
61.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
61.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
61.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
61.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
60.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
60.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
60.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
60.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
59.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
59.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
59.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
59.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
59.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
57.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
57.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
57.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
57.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
57.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
57.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
57.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
56.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
56.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
56.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
56.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
56.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
56.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
56.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
55.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
55.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
55.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
55.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
54.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
54.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
53.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
53.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
53.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
52.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
52.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
52.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
51.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
51.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
50.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
50.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
50.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
50.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
49.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
47.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
47.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
47.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
47.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
47.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
46.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
45.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
45.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
44.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
42.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
102.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 102.1
Samples: 4
Max nTPM: 107.8
Min nTPM: 95.0
Sample A
Male
107.8
Sample B
Male
106.1
Sample C
Female
99.5
Sample D
Female
95.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.