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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
125.9
nTPM
GTEx:
125.9
nTPM
FANTOM5:
522.8
Scaled Tags Per Million
Pig:
10.6
nTPM
Mouse:
8.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
125.9
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 125.9
Samples: 105
Max nTPM: 287.9
Min nTPM: 51.0
Std nTPM: 45.6
Median nTPM:
490_1
67 years, female
287.9
254_1
77 years, female
274.9
41_1
94 years, female
246.4
6_1
73 years, female
211.6
414_1
84 years, female
209.2
173_1
67 years, male
206.4
351_1
91 years, male
203.8
452_1
88 years, female
200.5
491_1
89 years, female
198.4
117_1
61 years, male
189.8
218_1
71 years, female
180.5
42_1
85 years, male
177.9
353_1
82 years, female
177.8
137_1
83 years, male
176.9
145_1
84 years, male
173.6
319_1
81 years, male
171.9
506_1
65 years, male
169.8
503_1
68 years, male
168.4
265_1
87 years, male
166.7
237_1
82 years, male
165.4
468_1
89 years, male
161.5
499_1
55 years, female
159.4
501_1
88 years, male
158.6
286_1
68 years, female
157.0
313_1
79 years, female
153.9
264_1
73 years, female
152.8
172_1
72 years, female
152.1
394_1
75 years, female
150.5
315_1
62 years, female
146.9
189_1
76 years, male
146.7
425_1
59 years, female
144.6
406_1
79 years, male
143.8
2_1
77 years, female
141.5
307_1
66 years, female
140.8
115_1
83 years, male
140.4
335_1
73 years, female
135.6
526_1
61 years, male
134.7
217_1
76 years, male
134.2
119_1
70 years, female
133.5
89_1
63 years, male
133.0
347_1
72 years, male
131.5
109_1
81 years, female
130.7
377_1
82 years, female
130.4
243_1
75 years, male
130.1
376_1
75 years, female
127.9
229_1
69 years, female
127.6
35_1
74 years, female
125.6
480_1
63 years, male
124.2
321_1
62 years, female
124.1
177_1
74 years, male
120.2
288_1
66 years, female
119.7
415_1
77 years, female
119.6
126_1
63 years, male
119.1
311_1
78 years, male
117.8
32_1
67 years, male
116.3
356_1
87 years, female
115.1
18_1
88 years, male
113.7
308_1
70 years, female
113.3
9_1
66 years, female
112.7
324_1
76 years, male
112.6
384_1
83 years, male
112.3
316_1
62 years, male
110.2
495_1
57 years, female
109.5
295_1
61 years, female
107.3
379_1
60 years, male
106.1
163_1
78 years, male
105.9
142_1
61 years, female
104.5
293_1
68 years, female
103.8
17_1
71 years, male
102.9
322_1
76 years, male
102.6
266_1
85 years, male
101.5
320_1
89 years, female
100.9
99_1
64 years, male
98.7
246_1
77 years, male
98.0
517_1
88 years, male
97.7
447_1
81 years, male
96.2
153_1
70 years, female
94.8
386_1
76 years, male
94.4
350_1
84 years, female
94.2
405_1
91 years, male
93.2
162_1
79 years, female
92.1
251_1
78 years, male
91.6
318_1
68 years, male
90.7
314_1
67 years, male
89.9
291_1
76 years, male
87.9
352_1
62 years, male
87.0
317_1
60 years, male
83.2
43_1
64 years, female
82.0
404_1
82 years, female
81.9
139_1
64 years, female
81.3
120_1
70 years, female
79.1
81_1
67 years, male
76.1
375_1
74 years, female
75.7
348_1
84 years, male
71.5
355_1
70 years, female
70.8
149_1
88 years, male
70.1
518_1
75 years, female
70.1
396_1
62 years, male
69.5
349_1
83 years, male
68.3
292_1
71 years, male
66.8
413_1
59 years, female
62.5
354_1
81 years, female
61.3
466_1
57 years, female
57.3
4_1
88 years, female
56.4
389_1
86 years, female
51.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.