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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
213.7
nTPM
FANTOM5:
211.6
Scaled Tags Per Million
Pig:
21.4
nTPM
Allen mouse:
0.1
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
213.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 176.4
2090
Male, age 80, both hemispheres
227.0
2188
Female, age 91, both hemispheres
210.6
2301
Female, age 85, both hemispheres
155.3
1984
Male, age 76, both hemispheres
112.6
Dorsal cochlear nucleus nTPM: 213.7
2802
Male, age 74, right hemisphere
257.7
2378
Male, age 80, both hemispheres
257.1
2370
Male, age 61, both hemispheres
236.9
2187
Female, age 91, both hemispheres
163.3
2058
Male, age 76, both hemispheres
153.4
Dorsal tegmental nucleus nTPM: 181.7
2358
Male, age 61, both hemispheres
234.5
2326
Male, age 74, both hemispheres
189.0
1936
Male, age 76, left hemisphere
152.5
2083
Male, age 80, both hemispheres
150.8
Dorsolateral tegmental area nTPM: 174.8
2337
Male, age 61, both hemispheres
244.6
2654
Male, age 80, both hemispheres
184.6
2360
Male, age 74, both hemispheres
174.2
2751
Female, age 85, both hemispheres
148.7
2141
Male, age 76, both hemispheres
121.8
Kolliker-Fuse nucleus nTPM: 162.1
2793
Female, age 91, left hemisphere
205.1
2163
Male, age 80, both hemispheres
140.9
2315
Male, age 76, right hemisphere
140.2
Lateral lemniscal nuclei nTPM: 158.8
2320
Female, age 91, left hemisphere
179.2
2746
Female, age 85, left hemisphere
177.2
2453
Male, age 74, right hemisphere
166.3
2036
Male, age 80, both hemispheres
155.1
2169
Male, age 76, both hemispheres
116.1
Lateral parabrachial nucleus nTPM: 180.8
2013
Male, age 80, both hemispheres
208.9
2792
Male, age 76, both hemispheres
185.0
2790
Male, age 61, both hemispheres
172.6
2139
Female, age 85, right hemisphere
156.7
Lateral vestibular nucleus nTPM: 152.5
2311
Male, age 80, both hemispheres
175.7
2184
Male, age 76, both hemispheres
129.2
Locus coeruleus nTPM: 119.1
2720
Male, age 74, both hemispheres
134.5
2317
Female, age 72, unknown
134.4
2788
Male, age 74, unknown
130.1
2162
Male, age 80, both hemispheres
127.0
2123
Female, age 91, both hemispheres
110.1
2014
Male, age 55, unknown
98.9
1980
Male, age 76, both hemispheres
98.4
Medial parabrachial nucleus nTPM: 157.4
2854
Male, age 80, both hemispheres
182.9
2156
Male, age 61, both hemispheres
172.0
2170
Female, age 91, both hemispheres
162.0
2786
Male, age 76, both hemispheres
150.1
2463
Female, age 85, right hemisphere
120.1
Medial periolivary nuclei nTPM: 170.2
2081
Male, age 80, both hemispheres
240.1
2458
Female, age 91, both hemispheres
190.8
2791
Male, age 74, right hemisphere
160.9
2063
Male, age 76, both hemispheres
132.3
2171
Female, age 85, both hemispheres
126.9
Motor facial nucleus nTPM: 171.7
2795
Female, age 91, both hemispheres
250.6
2126
Male, age 61, both hemispheres
199.5
2365
Male, age 74, right hemisphere
174.6
2697
Female, age 85, both hemispheres
157.2
2327
Male, age 80, both hemispheres
148.8
2062
Male, age 76, both hemispheres
99.2
Motor trigeminal nucleus nTPM: 184.3
2335
Male, age 61, both hemispheres
230.5
2321
Female, age 91, both hemispheres
183.3
2560
Male, age 74, both hemispheres
180.5
2079
Male, age 80, both hemispheres
172.6
2309
Male, age 76, both hemispheres
154.3
Nuclei of the trapezoid body nTPM: 136.4
2368
Female, age 91, both hemispheres
162.9
2166
Male, age 80, both hemispheres
154.8
2159
Male, age 61, both hemispheres
131.0
2735
Female, age 85, both hemispheres
128.3
1983
Male, age 76, both hemispheres
104.8
Nucleus raphe magnus nTPM: 158.8
2459
Female, age 91, both hemispheres
233.7
2051
Male, age 76, both hemispheres
175.2
2328
Male, age 80, both hemispheres
166.1
2455
Male, age 74, both hemispheres
134.7
2172
Female, age 85, both hemispheres
124.9
2160
Male, age 61, both hemispheres
118.1
Paramedian reticular nucleus nTPM: 166.4
2052
Male, age 76, both hemispheres
192.0
2313
Male, age 61, both hemispheres
184.4
2050
Female, age 85, both hemispheres
147.4
2057
Male, age 80, both hemispheres
142.0
Pedunculopontine tegmental nucleus nTPM: 154.4
2338
Male, age 61, both hemispheres
226.7
2334
Male, age 80, both hemispheres
140.2
1921
Female, age 85, both hemispheres
96.2
Pontine nuclei nTPM: 166.3
2115
Male, age 80, left hemisphere
247.7
2319
Female, age 91, both hemispheres
234.6
2454
Male, age 74, left hemisphere
159.9
2727
Male, age 61, right hemisphere
147.8
2109
Female, age 72, unknown
146.0
1863
Male, age 55, unknown
136.0
2787
Female, age 85, both hemispheres
135.1
1968
Male, age 76, left hemisphere
122.9
Pontine raphe nucleus nTPM: 131.2
2853
Male, age 76, midline
135.5
2122
Female, age 85, midline
126.9
Posteroventral cochlear nucleus nTPM: 210.3
2341
Male, age 80, both hemispheres
262.2
2371
Male, age 61, both hemispheres
255.0
2135
Female, age 91, both hemispheres
253.0
2752
Female, age 85, both hemispheres
141.8
2070
Male, age 76, both hemispheres
139.3
Principal sensory trigeminal nucleus nTPM: 150.9
2367
Female, age 91, left hemisphere
195.6
2008
Male, age 80, left hemisphere
142.9
2324
Male, age 76, both hemispheres
139.1
2158
Male, age 61, both hemispheres
125.9
Reticular pontine nucleus, caudal nTPM: 161.9
2457
Female, age 91, both hemispheres
189.2
2559
Male, age 74, both hemispheres
178.2
2332
Male, age 80, right hemisphere
141.6
2092
Male, age 76, both hemispheres
138.5
Reticular pontine nucleus, oral nTPM: 154.0
2361
Male, age 74, both hemispheres
184.9
2366
Female, age 91, both hemispheres
168.5
2167
Male, age 76, both hemispheres
155.0
1939
Male, age 80, both hemispheres
138.8
2012
Female, age 85, both hemispheres
122.8
Reticulotegmental nucleus nTPM: 172.7
2452
Male, age 74, both hemispheres
202.1
2333
Male, age 80, both hemispheres
189.2
2322
Female, age 91, both hemispheres
163.4
2325
Male, age 76, both hemispheres
136.1
Spinal trigeminal nucleus, oral nTPM: 145.1
2164
Male, age 80, both hemispheres
186.5
1978
Male, age 76, both hemispheres
144.5
2737
Female, age 85, both hemispheres
104.4
Subcoeruleus area nTPM: 153.7
2451
Male, age 74, both hemispheres
207.3
2369
Female, age 85, left hemisphere
174.1
1958
Male, age 80, both hemispheres
138.5
2089
Male, age 76, left hemisphere
126.3
2323
Female, age 91, left hemisphere
122.2
Superior olive nTPM: 160.6
2561
Female, age 91, both hemispheres
204.7
2364
Male, age 74, right hemisphere
169.4
2329
Male, age 80, right hemisphere
168.2
2020
Male, age 76, both hemispheres
156.8
1875
Female, age 85, both hemispheres
103.8
Ventral periolivary nuclei nTPM: 171.3
2794
Female, age 91, left hemisphere
233.3
2023
Male, age 76, both hemispheres
172.5
2165
Male, age 80, both hemispheres
155.2
2130
Female, age 85, both hemispheres
124.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 173.2
2161
Male, age 80, both hemispheres
210.5
2456
Female, age 91, both hemispheres
207.5
2359
Male, age 61, both hemispheres
176.3
2840
Female, age 85, both hemispheres
167.0
2449
Male, age 74, both hemispheres
144.6
1959
Male, age 76, both hemispheres
133.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
21.4
Pig sample
Sample description
nTPM
Pons nTPM: 21.4
Samples: 4
Max nTPM: 29.4
Min nTPM: 15.3
Sample A
Female
15.3
Sample B
Female
20.8
Sample C
Male
29.4
Sample D
Male
20.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.