We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
18.0
nTPM
HPA Brain:
101.1
nTPM
GTEx:
18.0
nTPM
FANTOM5:
282.8
Scaled Tags Per Million
Pig:
95.6
nTPM
Mouse:
59.5
nTPM
Allen mouse:
0.3
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
101.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 86.5
1827
Male, age 72, unknown
95.0
2828
Female, age 72, unknown
93.8
2019
Male, age 18, unknown
93.4
1833
Male, age 53, unknown
92.5
2219
Male, age 76, both hemispheres
90.1
2411
Female, age 72, unknown
89.6
1870
Female, age 42, unknown
86.5
1830
Male, age 51, unknown
78.1
2666
Male, age 74, left hemisphere
74.1
2586
Male, age 75, left hemisphere
71.8
Dorsal raphe nucleus nTPM: 76.9
2298
Female, age 72, unknown
80.0
2750
Male, age 76, both hemispheres
79.8
2016
Female, age 72, unknown
78.5
2047
Male, age 72, unknown
74.1
1828
Male, age 53, unknown
72.2
Inferior colliculus nTPM: 92.7
2097
Female, age 72, unknown
104.9
1848
Female, age 42, unknown
102.3
2849
Male, age 72, unknown
83.4
1890
Male, age 53, unknown
80.2
Median raphe nucleus nTPM: 63.6
2220
Male, age 76, midline
63.6
Periaquaductal grey, anterior nTPM: 100.4
1947
Male, age 18, unknown
112.5
2502
Female, age 75, unknown
101.9
1795
Male, age 51, unknown
86.7
Periaquaductal grey, dorsal nTPM: 71.8
2464
Female, age 72, unknown
83.2
1840
Male, age 53, unknown
79.1
1831
Male, age 72, unknown
63.8
2850
Male, age 76, both hemispheres
61.3
Periaquaductal grey, lateral nTPM: 69.2
2272
Male, age 74, both hemispheres
75.0
2053
Male, age 18, unknown
70.3
2140
Male, age 76, both hemispheres
62.4
Pretectal area nTPM: 88.9
1817
Female, age 42, unknown
106.4
2007
Male, age 72, unknown
103.5
2667
Female, age 75, unknown
97.4
1944
Female, age 72, unknown
93.4
1816
Male, age 51, unknown
92.2
1815
Male, age 53, unknown
91.7
2316
Male, age 76, right hemisphere
82.7
2224
Female, age 72, unknown
82.0
2273
Male, age 74, both hemispheres
80.0
2825
Male, age 18, unknown
77.4
2407
Male, age 75, both hemispheres
71.7
Red nucleus nTPM: 100.5
1821
Female, age 72, unknown
137.1
1904
Male, age 53, unknown
115.6
1954
Female, age 42, unknown
113.9
2503
Female, age 72, unknown
110.6
1865
Male, age 51, unknown
108.9
2823
Male, age 76, right hemisphere
102.8
2227
Male, age 72, unknown
102.1
2769
Male, age 72, unknown
97.3
2785
Male, age 18, unknown
89.8
2725
Female, age 75, unknown
85.6
2588
Male, age 74, left hemisphere
75.6
2584
Male, age 75, left hemisphere
66.1
Substantia nigra nTPM: 101.1
1916
Female, age 42, unknown
154.1
2241
Male, age 72, unknown
121.7
1851
Male, age 51, unknown
112.3
1889
Female, age 72, unknown
109.5
2409
Female, age 72, unknown
107.5
1941
Male, age 53, unknown
100.0
2699
Male, age 18, unknown
88.8
2590
Female, age 75, unknown
81.6
2665
Male, age 74, both hemispheres
69.1
2583
Male, age 75, right hemisphere
67.1
Superior colliculus nTPM: 84.2
1895
Male, age 76, right hemisphere
107.6
2668
Female, age 75, unknown
102.2
2261
Male, age 18, unknown
92.2
1796
Male, age 53, unknown
89.9
2087
Female, age 72, unknown
87.5
2587
Male, age 74, left hemisphere
82.8
1839
Male, age 51, unknown
82.6
2664
Male, age 75, both hemispheres
74.5
1995
Male, age 72, unknown
64.7
1913
Female, age 42, unknown
57.9
Ventral tegmental area nTPM: 85.4
2410
Female, age 72, unknown
112.4
1915
Female, age 42, unknown
101.3
2218
Male, age 76, both hemispheres
88.9
1942
Male, age 51, unknown
80.8
2223
Female, age 72, unknown
65.5
2021
Male, age 53, unknown
63.7
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
18.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 18.0
Samples: 139
Max nTPM: 37.3
Min nTPM: 5.1
Std nTPM: 5.7
Median nTPM: 17.0
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
37.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
35.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
34.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
32.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
32.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
31.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
30.5
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
30.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
29.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
28.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
26.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
25.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
25.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
24.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
24.4
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
24.3
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
24.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
23.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
23.0
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
22.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
22.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
22.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
22.2
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
22.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
22.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
21.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
21.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
21.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
21.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
21.5
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
21.4
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
21.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
21.3
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
21.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
20.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
20.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
20.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
20.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
20.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
20.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
20.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
20.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
20.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
19.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
19.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
19.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
19.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
19.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
19.6
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
19.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
19.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
19.4
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
19.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
19.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
19.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
18.9
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
18.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
18.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
18.6
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
18.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
18.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
18.2
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
18.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
17.9
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
17.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
17.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
17.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
17.1
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
17.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
17.0
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
17.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
16.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
16.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
16.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
16.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
16.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
16.4
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
16.3
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
16.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
16.2
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
16.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
16.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
15.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
15.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
15.7
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
15.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
15.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
15.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
15.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
15.6
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
15.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
15.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
15.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
15.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
15.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
15.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
14.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
14.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
14.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
14.6
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
14.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
14.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
14.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
14.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
13.9
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
13.8
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
13.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
13.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
13.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
13.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
13.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
13.3
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
13.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
13.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
13.2
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
13.2
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
13.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
13.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
13.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
12.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
12.7
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
12.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
12.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
12.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
12.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
11.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
11.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
11.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
11.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
10.6
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
10.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
10.3
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
9.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
9.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
9.2
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
8.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
8.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
7.5
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
5.1
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
59.5
Mouse sample
Sample description
nTPM
Midbrain nTPM: 59.5
Samples: 4
Max nTPM: 62.1
Min nTPM: 55.8
Sample A
Male
55.8
Sample B
Male
61.1
Sample C
Female
62.1
Sample D
Female
58.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.