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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
62.5
nTPM
GTEx:
62.5
nTPM
FANTOM5:
69.1
Scaled Tags Per Million
Pig:
279.0
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
62.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 62.5
Samples: 105
Max nTPM: 183.5
Min nTPM: 4.3
Std nTPM: 38.3
Median nTPM:
352_1
62 years, male
183.5
356_1
87 years, female
178.8
354_1
81 years, female
159.8
163_1
78 years, male
156.9
319_1
81 years, male
135.6
218_1
71 years, female
132.8
394_1
75 years, female
129.6
353_1
82 years, female
126.5
172_1
72 years, female
120.4
349_1
83 years, male
118.4
350_1
84 years, female
118.0
377_1
82 years, female
115.9
351_1
91 years, male
111.0
386_1
76 years, male
110.8
425_1
59 years, female
106.0
355_1
70 years, female
103.2
292_1
71 years, male
102.3
293_1
68 years, female
99.8
177_1
74 years, male
99.2
406_1
79 years, male
95.5
335_1
73 years, female
94.2
243_1
75 years, male
93.7
503_1
68 years, male
91.0
376_1
75 years, female
88.3
286_1
68 years, female
87.8
318_1
68 years, male
82.3
506_1
65 years, male
81.9
320_1
89 years, female
81.7
452_1
88 years, female
78.1
480_1
63 years, male
77.1
251_1
78 years, male
75.6
189_1
76 years, male
74.2
517_1
88 years, male
73.3
379_1
60 years, male
73.2
389_1
86 years, female
73.2
375_1
74 years, female
73.1
295_1
61 years, female
71.9
237_1
82 years, male
70.3
317_1
60 years, male
68.9
404_1
82 years, female
66.9
264_1
73 years, female
66.8
321_1
62 years, female
65.5
526_1
61 years, male
65.5
405_1
91 years, male
65.1
447_1
81 years, male
65.0
384_1
83 years, male
63.6
266_1
85 years, male
61.8
229_1
69 years, female
57.4
115_1
83 years, male
57.1
246_1
77 years, male
56.7
468_1
89 years, male
56.5
99_1
64 years, male
55.9
173_1
67 years, male
55.9
6_1
73 years, female
55.8
291_1
76 years, male
55.3
316_1
62 years, male
54.1
396_1
62 years, male
53.3
2_1
77 years, female
52.3
254_1
77 years, female
48.8
265_1
87 years, male
48.7
348_1
84 years, male
47.0
347_1
72 years, male
46.9
322_1
76 years, male
46.3
4_1
88 years, female
46.0
126_1
63 years, male
43.6
137_1
83 years, male
43.6
9_1
66 years, female
42.8
499_1
55 years, female
42.2
17_1
71 years, male
41.8
518_1
75 years, female
41.5
288_1
66 years, female
37.6
324_1
76 years, male
36.8
35_1
74 years, female
35.8
109_1
81 years, female
35.8
313_1
79 years, female
34.4
311_1
78 years, male
34.2
153_1
70 years, female
34.1
217_1
76 years, male
34.1
307_1
66 years, female
33.5
18_1
88 years, male
33.2
120_1
70 years, female
31.4
117_1
61 years, male
31.1
145_1
84 years, male
30.7
162_1
79 years, female
29.1
142_1
61 years, female
27.6
42_1
85 years, male
27.0
314_1
67 years, male
26.2
315_1
62 years, female
26.1
415_1
77 years, female
25.1
466_1
57 years, female
23.4
81_1
67 years, male
22.8
414_1
84 years, female
22.4
43_1
64 years, female
22.2
32_1
67 years, male
22.0
495_1
57 years, female
20.6
41_1
94 years, female
20.2
308_1
70 years, female
17.9
119_1
70 years, female
17.8
139_1
64 years, female
16.9
149_1
88 years, male
15.2
89_1
63 years, male
14.6
501_1
88 years, male
13.4
413_1
59 years, female
9.5
490_1
67 years, female
8.2
491_1
89 years, female
4.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.