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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
69.9
nTPM
HPA Brain:
105.7
nTPM
GTEx:
69.9
nTPM
FANTOM5:
69.2
Scaled Tags Per Million
Pig:
36.7
nTPM
Mouse:
58.3
nTPM
Allen mouse:
1.7
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
105.7
Sample id
Sample description
nTPM
Amygdala nTPM: 55.9
2695
Female, age 67, right hemisphere
81.2
2814
Male, age 76, right hemisphere
60.8
2517
Female, age 94, left hemisphere
60.3
2514
Male, age 75, right hemisphere
41.0
1987
Female, age 91, left hemisphere
36.4
Basal amygdala nTPM: 76.2
2827
Female, age 67, right hemisphere
169.7
2685
Female, age 94, left hemisphere
71.6
2609
Male, age 75, right hemisphere
69.0
2110
Male, age 80, left hemisphere
54.1
2243
Female, age 91, right hemisphere
47.3
1955
Male, age 76, both hemispheres
45.4
Central amygdala nTPM: 88.2
2826
Female, age 94, left hemisphere
198.3
2515
Male, age 75, right hemisphere
74.7
1905
Male, age 76, both hemispheres
66.6
2239
Male, age 80, left hemisphere
55.0
2701
Female, age 91, right hemisphere
46.3
Corticomedial amygdala nTPM: 53.2
2535
Female, age 67, right hemisphere
90.5
2428
Male, age 75, right hemisphere
64.2
2829
Male, age 80, left hemisphere
50.3
2429
Female, age 94, left hemisphere
44.4
2240
Male, age 76, both hemispheres
36.8
2242
Female, age 91, right hemisphere
32.9
Lateral amygdala nTPM: 105.7
2830
Female, age 67, right hemisphere
272.1
2534
Female, age 94, left hemisphere
114.0
2516
Male, age 75, right hemisphere
77.0
1883
Male, age 76, both hemispheres
58.5
2256
Male, age 80, left hemisphere
57.3
2255
Female, age 91, right hemisphere
55.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
69.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 69.9
Samples: 152
Max nTPM: 542.0
Min nTPM: 23.9
Std nTPM: 51.3
Median nTPM: 61.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
542.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
298.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
183.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
166.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
159.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
138.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
134.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
128.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
125.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
122.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
122.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
114.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
110.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
108.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
108.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
102.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
100.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
100.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
99.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
95.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
92.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
92.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
91.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
90.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
89.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
89.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
88.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
87.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
85.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
84.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
83.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
83.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
82.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
82.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
82.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
81.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
81.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
80.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
80.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
79.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
77.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
77.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
77.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
77.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
76.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
76.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
74.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
74.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
73.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
73.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
73.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
73.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
72.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
71.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
70.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
70.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
70.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
69.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
67.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
66.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
66.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
66.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
66.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
65.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
65.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
64.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
64.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
64.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
63.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
63.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
63.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
63.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
63.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
63.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
62.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
61.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
61.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
59.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
58.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
58.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
57.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
57.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
57.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
56.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
56.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
56.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
56.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
55.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
54.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
53.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
53.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
53.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
53.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
53.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
52.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
52.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
51.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
51.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
50.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
50.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
49.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
49.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
48.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
47.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
47.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
47.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
47.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
46.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
45.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
45.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
45.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
45.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
44.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
44.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
44.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
43.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
43.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
42.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
42.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
42.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
42.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
42.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
42.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
42.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
42.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
41.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
41.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
41.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
39.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
38.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
37.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
37.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
37.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
37.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
37.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
37.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
36.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
36.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
36.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
35.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
35.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
34.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
34.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
30.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
30.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
29.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
27.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
26.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
25.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
25.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
24.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
23.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
58.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 58.3
Samples: 4
Max nTPM: 67.6
Min nTPM: 52.6
Sample A
Male
52.6
Sample B
Male
58.3
Sample C
Female
67.6
Sample D
Female
54.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.