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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
67.8
nTPM
HPA Brain:
194.9
nTPM
GTEx:
67.8
nTPM
FANTOM5:
171.1
Scaled Tags Per Million
Pig:
102.8
nTPM
Mouse:
104.3
nTPM
Allen mouse:
6.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
194.9
Sample id
Sample description
nTPM
Amygdala nTPM: 148.8
2695
Female, age 67, right hemisphere
196.1
2517
Female, age 94, left hemisphere
177.4
2514
Male, age 75, right hemisphere
154.8
1987
Female, age 91, left hemisphere
128.4
2814
Male, age 76, right hemisphere
87.5
Basal amygdala nTPM: 194.9
2110
Male, age 80, left hemisphere
244.9
2609
Male, age 75, right hemisphere
207.7
2685
Female, age 94, left hemisphere
204.7
2827
Female, age 67, right hemisphere
183.1
2243
Female, age 91, right hemisphere
167.9
1955
Male, age 76, both hemispheres
161.1
Central amygdala nTPM: 148.0
2515
Male, age 75, right hemisphere
194.2
2826
Female, age 94, left hemisphere
179.4
2239
Male, age 80, left hemisphere
173.1
2701
Female, age 91, right hemisphere
108.3
1905
Male, age 76, both hemispheres
85.2
Corticomedial amygdala nTPM: 163.9
2829
Male, age 80, left hemisphere
198.5
2428
Male, age 75, right hemisphere
188.8
2429
Female, age 94, left hemisphere
167.1
2535
Female, age 67, right hemisphere
166.4
2240
Male, age 76, both hemispheres
155.1
2242
Female, age 91, right hemisphere
107.5
Lateral amygdala nTPM: 155.6
2516
Male, age 75, right hemisphere
201.9
2534
Female, age 94, left hemisphere
181.6
2830
Female, age 67, right hemisphere
178.0
2256
Male, age 80, left hemisphere
157.5
2255
Female, age 91, right hemisphere
116.5
1883
Male, age 76, both hemispheres
98.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
67.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 67.8
Samples: 152
Max nTPM: 124.3
Min nTPM: 8.6
Std nTPM: 19.4
Median nTPM: 65.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
124.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
113.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
107.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
105.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
104.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
104.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
103.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
99.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
98.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
98.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
97.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
96.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
96.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
95.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
95.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
95.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
92.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
92.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
92.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
91.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
91.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
91.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
91.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
91.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
90.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
90.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
90.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
90.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
89.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
89.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
88.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
88.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
86.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
86.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
85.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
82.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
82.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
82.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
80.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
79.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
78.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
77.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
76.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
76.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
76.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
75.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
75.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
74.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
74.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
74.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
73.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
73.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
73.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
72.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
72.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
72.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
72.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
72.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
72.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
72.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
71.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
70.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
70.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
70.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
69.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
68.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
68.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
67.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
67.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
67.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
67.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
66.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
66.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
66.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
66.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
65.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
65.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
64.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
64.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
64.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
63.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
63.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
62.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
62.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
62.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
62.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
61.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
61.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
61.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
61.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
61.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
61.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
60.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
60.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
60.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
59.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
59.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
58.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
58.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
58.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
58.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
57.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
57.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
56.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
56.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
56.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
56.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
56.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
56.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
55.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
55.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
54.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
54.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
54.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
54.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
54.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
53.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
53.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
53.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
53.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
53.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
53.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
52.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
52.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
52.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
51.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
51.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
51.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
51.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
51.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
50.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
49.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
48.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
48.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
46.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
45.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
45.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
45.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
43.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
42.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
41.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
41.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
41.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
39.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
38.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
37.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
35.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
35.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
32.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
30.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
24.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
8.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
104.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 104.3
Samples: 4
Max nTPM: 111.0
Min nTPM: 97.9
Sample A
Male
101.9
Sample B
Male
106.4
Sample C
Female
111.0
Sample D
Female
97.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.