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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
173.1
nTPM
GTEx:
173.1
nTPM
FANTOM5:
484.2
Scaled Tags Per Million
Pig:
122.7
nTPM
Mouse:
557.9
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
173.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 173.1
Samples: 105
Max nTPM: 254.1
Min nTPM: 125.8
Std nTPM: 27.0
Median nTPM:
137_1
83 years, male
254.1
490_1
67 years, female
248.8
495_1
57 years, female
240.0
43_1
64 years, female
239.1
145_1
84 years, male
227.6
17_1
71 years, male
226.8
6_1
73 years, female
224.2
415_1
77 years, female
217.5
162_1
79 years, female
212.2
491_1
89 years, female
211.8
35_1
74 years, female
208.0
315_1
62 years, female
206.8
139_1
64 years, female
205.1
89_1
63 years, male
202.2
149_1
88 years, male
200.9
81_1
67 years, male
200.8
109_1
81 years, female
200.8
317_1
60 years, male
200.0
466_1
57 years, female
198.9
142_1
61 years, female
197.1
42_1
85 years, male
195.0
518_1
75 years, female
191.7
126_1
63 years, male
191.0
324_1
76 years, male
190.1
117_1
61 years, male
189.8
99_1
64 years, male
189.3
120_1
70 years, female
187.6
501_1
88 years, male
187.1
18_1
88 years, male
186.0
322_1
76 years, male
185.9
413_1
59 years, female
185.5
379_1
60 years, male
184.9
414_1
84 years, female
182.9
480_1
63 years, male
182.7
9_1
66 years, female
182.4
217_1
76 years, male
182.3
32_1
67 years, male
181.2
396_1
62 years, male
180.4
354_1
81 years, female
178.7
4_1
88 years, female
177.1
308_1
70 years, female
176.2
266_1
85 years, male
175.9
119_1
70 years, female
175.4
189_1
76 years, male
175.0
153_1
70 years, female
174.6
526_1
61 years, male
174.5
468_1
89 years, male
174.3
335_1
73 years, female
174.1
452_1
88 years, female
173.1
316_1
62 years, male
171.5
2_1
77 years, female
170.7
251_1
78 years, male
169.8
350_1
84 years, female
169.6
288_1
66 years, female
169.5
499_1
55 years, female
169.5
313_1
79 years, female
168.4
307_1
66 years, female
167.4
115_1
83 years, male
166.8
321_1
62 years, female
165.8
265_1
87 years, male
165.6
404_1
82 years, female
164.1
246_1
77 years, male
164.0
311_1
78 years, male
163.7
389_1
86 years, female
162.1
347_1
72 years, male
161.8
293_1
68 years, female
161.5
173_1
67 years, male
160.9
377_1
82 years, female
160.2
375_1
74 years, female
159.8
41_1
94 years, female
159.7
243_1
75 years, male
157.5
172_1
72 years, female
157.0
406_1
79 years, male
156.6
291_1
76 years, male
155.8
314_1
67 years, male
155.4
376_1
75 years, female
154.5
384_1
83 years, male
153.5
355_1
70 years, female
153.3
405_1
91 years, male
153.2
348_1
84 years, male
152.2
425_1
59 years, female
151.6
292_1
71 years, male
151.5
254_1
77 years, female
149.5
386_1
76 years, male
149.4
320_1
89 years, female
149.3
237_1
82 years, male
146.3
353_1
82 years, female
146.0
352_1
62 years, male
145.6
319_1
81 years, male
145.1
295_1
61 years, female
145.0
503_1
68 years, male
143.8
517_1
88 years, male
143.8
318_1
68 years, male
143.0
218_1
71 years, female
142.8
506_1
65 years, male
142.8
447_1
81 years, male
142.3
177_1
74 years, male
141.7
394_1
75 years, female
140.2
349_1
83 years, male
138.6
229_1
69 years, female
138.0
351_1
91 years, male
137.9
356_1
87 years, female
132.6
286_1
68 years, female
129.0
163_1
78 years, male
128.9
264_1
73 years, female
125.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.