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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
292.0
nTPM
FANTOM5:
1022.5
Scaled Tags Per Million
Pig:
254.0
nTPM
Allen mouse:
13.3
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
292.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 189.4
2188
Female, age 91, both hemispheres
207.7
1984
Male, age 76, both hemispheres
195.2
2301
Female, age 85, both hemispheres
192.4
2090
Male, age 80, both hemispheres
162.4
Dorsal cochlear nucleus nTPM: 170.5
2187
Female, age 91, both hemispheres
199.7
2058
Male, age 76, both hemispheres
174.4
2370
Male, age 61, both hemispheres
174.1
2802
Male, age 74, right hemisphere
160.1
2378
Male, age 80, both hemispheres
144.2
Dorsal tegmental nucleus nTPM: 179.8
2083
Male, age 80, both hemispheres
204.8
2326
Male, age 74, both hemispheres
185.6
1936
Male, age 76, left hemisphere
171.3
2358
Male, age 61, both hemispheres
157.3
Dorsolateral tegmental area nTPM: 185.6
2751
Female, age 85, both hemispheres
252.5
2654
Male, age 80, both hemispheres
207.8
2360
Male, age 74, both hemispheres
207.7
2141
Male, age 76, both hemispheres
149.7
2337
Male, age 61, both hemispheres
110.2
Kolliker-Fuse nucleus nTPM: 226.5
2163
Male, age 80, both hemispheres
236.5
2315
Male, age 76, right hemisphere
232.5
2793
Female, age 91, left hemisphere
210.6
Lateral lemniscal nuclei nTPM: 251.5
2169
Male, age 76, both hemispheres
290.7
2036
Male, age 80, both hemispheres
271.2
2746
Female, age 85, left hemisphere
259.0
2453
Male, age 74, right hemisphere
244.5
2320
Female, age 91, left hemisphere
191.8
Lateral parabrachial nucleus nTPM: 227.3
2139
Female, age 85, right hemisphere
278.0
2013
Male, age 80, both hemispheres
235.7
2792
Male, age 76, both hemispheres
202.0
2790
Male, age 61, both hemispheres
193.4
Lateral vestibular nucleus nTPM: 189.2
2184
Male, age 76, both hemispheres
203.9
2311
Male, age 80, both hemispheres
174.5
Locus coeruleus nTPM: 249.0
2123
Female, age 91, both hemispheres
297.5
2014
Male, age 55, unknown
268.2
2788
Male, age 74, unknown
258.0
1980
Male, age 76, both hemispheres
253.3
2720
Male, age 74, both hemispheres
246.8
2317
Female, age 72, unknown
220.1
2162
Male, age 80, both hemispheres
199.2
Medial parabrachial nucleus nTPM: 210.9
2170
Female, age 91, both hemispheres
238.8
2854
Male, age 80, both hemispheres
230.6
2463
Female, age 85, right hemisphere
221.7
2786
Male, age 76, both hemispheres
185.7
2156
Male, age 61, both hemispheres
177.5
Medial periolivary nuclei nTPM: 251.7
2063
Male, age 76, both hemispheres
309.9
2171
Female, age 85, both hemispheres
293.5
2791
Male, age 74, right hemisphere
284.2
2081
Male, age 80, both hemispheres
198.1
2458
Female, age 91, both hemispheres
172.8
Motor facial nucleus nTPM: 235.9
2062
Male, age 76, both hemispheres
321.7
2365
Male, age 74, right hemisphere
282.6
2697
Female, age 85, both hemispheres
220.0
2795
Female, age 91, both hemispheres
210.9
2327
Male, age 80, both hemispheres
203.3
2126
Male, age 61, both hemispheres
176.9
Motor trigeminal nucleus nTPM: 189.3
2079
Male, age 80, both hemispheres
227.4
2560
Male, age 74, both hemispheres
207.2
2309
Male, age 76, both hemispheres
186.5
2335
Male, age 61, both hemispheres
176.1
2321
Female, age 91, both hemispheres
149.6
Nuclei of the trapezoid body nTPM: 259.5
2159
Male, age 61, both hemispheres
309.9
2735
Female, age 85, both hemispheres
297.6
1983
Male, age 76, both hemispheres
287.3
2166
Male, age 80, both hemispheres
205.2
2368
Female, age 91, both hemispheres
197.4
Nucleus raphe magnus nTPM: 276.1
2160
Male, age 61, both hemispheres
436.1
2455
Male, age 74, both hemispheres
281.6
2172
Female, age 85, both hemispheres
276.6
2051
Male, age 76, both hemispheres
236.2
2328
Male, age 80, both hemispheres
217.1
2459
Female, age 91, both hemispheres
208.8
Paramedian reticular nucleus nTPM: 227.5
2050
Female, age 85, both hemispheres
268.8
2057
Male, age 80, both hemispheres
231.4
2313
Male, age 61, both hemispheres
211.6
2052
Male, age 76, both hemispheres
198.2
Pedunculopontine tegmental nucleus nTPM: 194.8
2334
Male, age 80, both hemispheres
209.3
1921
Female, age 85, both hemispheres
203.9
2338
Male, age 61, both hemispheres
171.4
Pontine nuclei nTPM: 292.0
2727
Male, age 61, right hemisphere
452.2
1863
Male, age 55, unknown
336.4
2787
Female, age 85, both hemispheres
307.6
1968
Male, age 76, left hemisphere
283.2
2454
Male, age 74, left hemisphere
283.2
2109
Female, age 72, unknown
278.8
2319
Female, age 91, both hemispheres
204.5
2115
Male, age 80, left hemisphere
190.3
Pontine raphe nucleus nTPM: 219.8
2122
Female, age 85, midline
267.9
2853
Male, age 76, midline
171.7
Posteroventral cochlear nucleus nTPM: 196.0
2752
Female, age 85, both hemispheres
225.5
2070
Male, age 76, both hemispheres
214.0
2135
Female, age 91, both hemispheres
191.9
2341
Male, age 80, both hemispheres
175.1
2371
Male, age 61, both hemispheres
173.5
Principal sensory trigeminal nucleus nTPM: 249.6
2158
Male, age 61, both hemispheres
344.9
2008
Male, age 80, left hemisphere
263.0
2367
Female, age 91, left hemisphere
202.0
2324
Male, age 76, both hemispheres
188.6
Reticular pontine nucleus, caudal nTPM: 211.6
2092
Male, age 76, both hemispheres
244.8
2332
Male, age 80, right hemisphere
217.1
2457
Female, age 91, both hemispheres
204.2
2559
Male, age 74, both hemispheres
180.1
Reticular pontine nucleus, oral nTPM: 232.2
2361
Male, age 74, both hemispheres
306.3
2012
Female, age 85, both hemispheres
257.2
1939
Male, age 80, both hemispheres
209.5
2366
Female, age 91, both hemispheres
195.3
2167
Male, age 76, both hemispheres
192.8
Reticulotegmental nucleus nTPM: 190.4
2325
Male, age 76, both hemispheres
209.1
2322
Female, age 91, both hemispheres
187.6
2333
Male, age 80, both hemispheres
184.7
2452
Male, age 74, both hemispheres
180.3
Spinal trigeminal nucleus, oral nTPM: 210.5
2737
Female, age 85, both hemispheres
229.3
1978
Male, age 76, both hemispheres
210.4
2164
Male, age 80, both hemispheres
191.8
Subcoeruleus area nTPM: 212.3
1958
Male, age 80, both hemispheres
245.4
2369
Female, age 85, left hemisphere
235.6
2089
Male, age 76, left hemisphere
217.4
2323
Female, age 91, left hemisphere
206.8
2451
Male, age 74, both hemispheres
156.5
Superior olive nTPM: 249.4
2364
Male, age 74, right hemisphere
316.4
1875
Female, age 85, both hemispheres
307.2
2020
Male, age 76, both hemispheres
248.0
2329
Male, age 80, right hemisphere
207.9
2561
Female, age 91, both hemispheres
167.3
Ventral periolivary nuclei nTPM: 239.1
2130
Female, age 85, both hemispheres
302.1
2165
Male, age 80, both hemispheres
250.7
2023
Male, age 76, both hemispheres
248.7
2794
Female, age 91, left hemisphere
154.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 223.2
2449
Male, age 74, both hemispheres
262.3
1959
Male, age 76, both hemispheres
246.4
2840
Female, age 85, both hemispheres
232.2
2161
Male, age 80, both hemispheres
221.4
2456
Female, age 91, both hemispheres
190.3
2359
Male, age 61, both hemispheres
186.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
254.0
Pig sample
Sample description
nTPM
Pons nTPM: 254.0
Samples: 4
Max nTPM: 361.7
Min nTPM: 189.5
Sample A
Female
361.7
Sample B
Female
189.5
Sample C
Male
236.4
Sample D
Male
228.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.