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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
152.0
nTPM
HPA Brain:
277.7
nTPM
GTEx:
152.0
nTPM
FANTOM5:
662.2
Scaled Tags Per Million
Pig:
270.4
nTPM
Mouse:
593.6
nTPM
Allen mouse:
13.6
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
277.7
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 222.2
2019
Male, age 18, unknown
269.7
1827
Male, age 72, unknown
245.2
2411
Female, age 72, unknown
235.1
2666
Male, age 74, left hemisphere
229.9
2828
Female, age 72, unknown
229.5
1870
Female, age 42, unknown
226.9
2586
Male, age 75, left hemisphere
216.8
1830
Male, age 51, unknown
193.5
1833
Male, age 53, unknown
190.9
2219
Male, age 76, both hemispheres
184.9
Dorsal raphe nucleus nTPM: 203.2
2298
Female, age 72, unknown
251.9
2016
Female, age 72, unknown
211.1
2750
Male, age 76, both hemispheres
200.3
1828
Male, age 53, unknown
186.2
2047
Male, age 72, unknown
166.3
Inferior colliculus nTPM: 221.9
2097
Female, age 72, unknown
279.6
1848
Female, age 42, unknown
215.8
2849
Male, age 72, unknown
198.2
1890
Male, age 53, unknown
194.2
Median raphe nucleus nTPM: 192.0
2220
Male, age 76, midline
192.0
Periaquaductal grey, anterior nTPM: 253.7
2502
Female, age 75, unknown
271.2
1795
Male, age 51, unknown
264.3
1947
Male, age 18, unknown
225.7
Periaquaductal grey, dorsal nTPM: 213.8
1840
Male, age 53, unknown
227.4
2464
Female, age 72, unknown
222.1
2850
Male, age 76, both hemispheres
211.1
1831
Male, age 72, unknown
194.4
Periaquaductal grey, lateral nTPM: 221.9
2272
Male, age 74, both hemispheres
251.3
2053
Male, age 18, unknown
221.7
2140
Male, age 76, both hemispheres
192.8
Pretectal area nTPM: 277.7
1816
Male, age 51, unknown
344.1
1817
Female, age 42, unknown
332.6
2007
Male, age 72, unknown
330.5
1944
Female, age 72, unknown
321.0
1815
Male, age 53, unknown
307.0
2273
Male, age 74, both hemispheres
297.0
2667
Female, age 75, unknown
281.7
2224
Female, age 72, unknown
245.8
2407
Male, age 75, both hemispheres
208.2
2825
Male, age 18, unknown
204.7
2316
Male, age 76, right hemisphere
182.1
Red nucleus nTPM: 202.5
2785
Male, age 18, unknown
258.7
1821
Female, age 72, unknown
238.8
1865
Male, age 51, unknown
215.9
2503
Female, age 72, unknown
208.6
1954
Female, age 42, unknown
205.5
2725
Female, age 75, unknown
203.8
2227
Male, age 72, unknown
197.8
2769
Male, age 72, unknown
197.4
1904
Male, age 53, unknown
197.2
2823
Male, age 76, right hemisphere
180.2
2588
Male, age 74, left hemisphere
163.3
2584
Male, age 75, left hemisphere
162.9
Substantia nigra nTPM: 206.6
1889
Female, age 72, unknown
274.4
1941
Male, age 53, unknown
240.5
2241
Male, age 72, unknown
228.9
1851
Male, age 51, unknown
225.1
2409
Female, age 72, unknown
224.7
1916
Female, age 42, unknown
209.6
2583
Male, age 75, right hemisphere
193.0
2590
Female, age 75, unknown
171.4
2699
Male, age 18, unknown
158.8
2665
Male, age 74, both hemispheres
139.6
Superior colliculus nTPM: 249.9
2261
Male, age 18, unknown
298.0
2087
Female, age 72, unknown
290.2
1796
Male, age 53, unknown
262.5
2668
Female, age 75, unknown
260.0
1913
Female, age 42, unknown
256.4
2664
Male, age 75, both hemispheres
247.6
1995
Male, age 72, unknown
247.1
2587
Male, age 74, left hemisphere
228.6
1895
Male, age 76, right hemisphere
207.2
1839
Male, age 51, unknown
201.7
Ventral tegmental area nTPM: 207.6
2410
Female, age 72, unknown
261.5
2223
Female, age 72, unknown
227.2
2021
Male, age 53, unknown
196.0
1915
Female, age 42, unknown
195.2
2218
Male, age 76, both hemispheres
183.0
1942
Male, age 51, unknown
182.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
152.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 152.0
Samples: 139
Max nTPM: 337.2
Min nTPM: 66.2
Std nTPM: 43.7
Median nTPM: 143.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
337.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
304.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
263.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
262.1
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
250.2
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
243.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
232.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
227.9
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
221.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
220.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
212.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
212.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
209.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
205.9
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
200.0
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
198.3
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
196.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
196.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
194.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
193.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
190.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
189.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
188.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
188.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
187.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
187.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
184.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
184.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
184.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
183.8
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
183.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
182.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
182.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
179.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
178.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
176.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
176.2
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
174.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
172.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
172.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
170.2
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
168.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
166.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
166.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
163.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
163.0
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
161.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
161.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
159.7
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
159.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
158.3
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
157.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
157.2
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
156.7
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
155.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
153.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
153.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
152.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
152.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
151.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
149.9
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
149.9
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
148.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
148.0
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
147.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
145.9
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
145.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
144.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
144.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
143.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
143.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
142.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
141.9
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
141.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
141.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
141.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
140.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
140.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
140.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
139.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
139.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
138.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
138.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
138.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
138.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
138.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
137.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
137.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
137.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
134.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
133.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
133.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
132.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
131.9
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
131.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
131.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
130.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
129.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
129.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
128.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
128.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
126.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
125.0
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
124.1
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
123.8
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
123.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
122.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
122.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
121.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
121.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
119.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
118.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
117.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
116.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
112.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
110.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
109.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
108.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
105.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
104.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
104.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
103.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
103.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
103.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
102.3
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
101.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
99.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
98.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
97.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
97.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
95.8
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
93.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
91.1
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
90.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
88.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
87.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
84.4
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
71.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
66.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
593.6
Mouse sample
Sample description
nTPM
Midbrain nTPM: 593.6
Samples: 4
Max nTPM: 622.4
Min nTPM: 580.4
Sample A
Male
622.4
Sample B
Male
585.5
Sample C
Female
580.4
Sample D
Female
585.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.