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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
584.7
nTPM
GTEx:
584.7
nTPM
FANTOM5:
15.4
Scaled Tags Per Million
Pig:
210.6
nTPM
Mouse:
970.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
584.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 584.7
Samples: 105
Max nTPM: 850.5
Min nTPM: 392.9
Std nTPM: 86.1
Median nTPM:
321_1
62 years, female
850.5
355_1
70 years, female
765.9
389_1
86 years, female
758.2
322_1
76 years, male
741.6
396_1
62 years, male
729.5
153_1
70 years, female
718.1
237_1
82 years, male
713.1
384_1
83 years, male
711.9
120_1
70 years, female
701.2
375_1
74 years, female
699.7
246_1
77 years, male
693.7
447_1
81 years, male
688.3
35_1
74 years, female
688.2
452_1
88 years, female
683.4
126_1
63 years, male
681.2
379_1
60 years, male
677.1
218_1
71 years, female
676.6
319_1
81 years, male
676.0
376_1
75 years, female
673.1
2_1
77 years, female
671.1
526_1
61 years, male
670.0
243_1
75 years, male
667.7
265_1
87 years, male
667.2
17_1
71 years, male
663.9
394_1
75 years, female
662.6
405_1
91 years, male
653.4
377_1
82 years, female
650.7
177_1
74 years, male
646.7
229_1
69 years, female
642.8
251_1
78 years, male
639.2
386_1
76 years, male
637.8
189_1
76 years, male
630.0
335_1
73 years, female
625.4
320_1
89 years, female
616.0
349_1
83 years, male
615.8
254_1
77 years, female
614.8
316_1
62 years, male
613.7
404_1
82 years, female
611.6
353_1
82 years, female
608.3
172_1
72 years, female
605.5
351_1
91 years, male
605.4
145_1
84 years, male
603.1
217_1
76 years, male
601.7
6_1
73 years, female
600.2
347_1
72 years, male
599.5
264_1
73 years, female
598.9
99_1
64 years, male
590.6
414_1
84 years, female
590.6
163_1
78 years, male
588.6
503_1
68 years, male
585.1
495_1
57 years, female
582.5
354_1
81 years, female
580.6
139_1
64 years, female
574.3
406_1
79 years, male
573.5
286_1
68 years, female
571.1
315_1
62 years, female
567.9
115_1
83 years, male
565.4
137_1
83 years, male
564.0
317_1
60 years, male
559.9
307_1
66 years, female
559.8
348_1
84 years, male
559.6
266_1
85 years, male
558.2
18_1
88 years, male
555.9
415_1
77 years, female
554.0
4_1
88 years, female
552.2
350_1
84 years, female
552.0
425_1
59 years, female
551.8
291_1
76 years, male
551.2
173_1
67 years, male
544.5
311_1
78 years, male
541.7
41_1
94 years, female
541.1
352_1
62 years, male
541.0
468_1
89 years, male
538.5
318_1
68 years, male
537.6
517_1
88 years, male
536.0
142_1
61 years, female
532.9
81_1
67 years, male
530.1
356_1
87 years, female
527.7
42_1
85 years, male
520.2
292_1
71 years, male
519.6
466_1
57 years, female
519.4
32_1
67 years, male
518.8
499_1
55 years, female
517.6
491_1
89 years, female
516.7
119_1
70 years, female
514.5
288_1
66 years, female
514.4
295_1
61 years, female
513.7
324_1
76 years, male
507.6
162_1
79 years, female
504.7
413_1
59 years, female
492.3
308_1
70 years, female
492.1
480_1
63 years, male
485.6
518_1
75 years, female
482.5
117_1
61 years, male
477.8
314_1
67 years, male
477.8
109_1
81 years, female
473.4
89_1
63 years, male
465.4
9_1
66 years, female
463.9
293_1
68 years, female
462.9
506_1
65 years, male
460.3
313_1
79 years, female
459.1
501_1
88 years, male
441.5
43_1
64 years, female
393.6
490_1
67 years, female
393.4
149_1
88 years, male
392.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.