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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
677.4
nTPM
HPA Brain:
226.0
nTPM
GTEx:
677.4
nTPM
FANTOM5:
17.4
Scaled Tags Per Million
Pig:
555.7
nTPM
Mouse:
471.2
nTPM
Allen mouse:
8.0
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
226.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 203.7
2411
Female, age 72, unknown
241.6
2828
Female, age 72, unknown
216.5
2586
Male, age 75, left hemisphere
213.8
1827
Male, age 72, unknown
207.4
1870
Female, age 42, unknown
200.2
2666
Male, age 74, left hemisphere
199.1
2019
Male, age 18, unknown
196.6
1830
Male, age 51, unknown
192.1
1833
Male, age 53, unknown
192.0
2219
Male, age 76, both hemispheres
177.9
Dorsal raphe nucleus nTPM: 204.1
2016
Female, age 72, unknown
219.6
2298
Female, age 72, unknown
217.5
2750
Male, age 76, both hemispheres
206.1
1828
Male, age 53, unknown
194.2
2047
Male, age 72, unknown
182.9
Inferior colliculus nTPM: 206.9
2097
Female, age 72, unknown
220.6
1890
Male, age 53, unknown
206.3
1848
Female, age 42, unknown
201.5
2849
Male, age 72, unknown
199.3
Median raphe nucleus nTPM: 181.1
2220
Male, age 76, midline
181.1
Periaquaductal grey, anterior nTPM: 204.3
2502
Female, age 75, unknown
227.4
1795
Male, age 51, unknown
197.8
1947
Male, age 18, unknown
187.8
Periaquaductal grey, dorsal nTPM: 199.2
1840
Male, age 53, unknown
220.3
2464
Female, age 72, unknown
204.9
1831
Male, age 72, unknown
191.5
2850
Male, age 76, both hemispheres
179.9
Periaquaductal grey, lateral nTPM: 187.0
2053
Male, age 18, unknown
215.5
2272
Male, age 74, both hemispheres
174.0
2140
Male, age 76, both hemispheres
171.5
Pretectal area nTPM: 193.5
2007
Male, age 72, unknown
214.8
1817
Female, age 42, unknown
213.6
2316
Male, age 76, right hemisphere
206.8
1815
Male, age 53, unknown
201.9
1816
Male, age 51, unknown
198.9
2224
Female, age 72, unknown
190.3
2825
Male, age 18, unknown
189.1
2273
Male, age 74, both hemispheres
186.8
2407
Male, age 75, both hemispheres
177.7
1944
Female, age 72, unknown
174.8
2667
Female, age 75, unknown
174.0
Red nucleus nTPM: 212.9
2503
Female, age 72, unknown
240.7
1865
Male, age 51, unknown
228.1
1821
Female, age 72, unknown
226.8
2769
Male, age 72, unknown
222.8
2584
Male, age 75, left hemisphere
216.9
2227
Male, age 72, unknown
216.7
2588
Male, age 74, left hemisphere
209.7
1904
Male, age 53, unknown
207.3
2725
Female, age 75, unknown
203.8
2785
Male, age 18, unknown
201.9
1954
Female, age 42, unknown
193.2
2823
Male, age 76, right hemisphere
187.1
Substantia nigra nTPM: 226.0
1851
Male, age 51, unknown
264.0
2665
Male, age 74, both hemispheres
256.2
2409
Female, age 72, unknown
252.2
2699
Male, age 18, unknown
237.0
1916
Female, age 42, unknown
233.3
2241
Male, age 72, unknown
220.2
2590
Female, age 75, unknown
218.1
1889
Female, age 72, unknown
201.4
1941
Male, age 53, unknown
197.1
2583
Male, age 75, right hemisphere
181.0
Superior colliculus nTPM: 205.5
2587
Male, age 74, left hemisphere
246.8
1796
Male, age 53, unknown
228.9
2668
Female, age 75, unknown
218.0
1995
Male, age 72, unknown
205.3
2261
Male, age 18, unknown
201.3
1913
Female, age 42, unknown
198.7
1839
Male, age 51, unknown
196.7
2664
Male, age 75, both hemispheres
195.0
2087
Female, age 72, unknown
188.5
1895
Male, age 76, right hemisphere
175.7
Ventral tegmental area nTPM: 214.7
1915
Female, age 42, unknown
248.4
2223
Female, age 72, unknown
231.6
2410
Female, age 72, unknown
229.1
2021
Male, age 53, unknown
213.1
1942
Male, age 51, unknown
185.5
2218
Male, age 76, both hemispheres
180.8
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
677.4
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 677.4
Samples: 139
Max nTPM: 1673.2
Min nTPM: 342.0
Std nTPM: 215.5
Median nTPM: 642.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
1673.2
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
1429.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
1365.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
1293.7
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
1097.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
1086.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
1064.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
1053.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
1033.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
1016.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
1007.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
969.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
959.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
921.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
916.7
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
916.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
894.8
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
891.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
884.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
881.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
879.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
876.4
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
866.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
841.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
837.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
829.7
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
826.9
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
826.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
816.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
814.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
813.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
798.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
788.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
783.4
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
773.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
768.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
756.1
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
755.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
753.8
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
753.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
750.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
747.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
736.9
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
733.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
732.9
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
731.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
726.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
722.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
721.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
717.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
715.3
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
713.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
712.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
709.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
708.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
698.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
698.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
697.5
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
693.2
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
670.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
668.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
664.3
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
663.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
660.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
659.5
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
655.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
650.6
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
648.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
647.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
642.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
639.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
637.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
627.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
626.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
622.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
622.0
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
617.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
609.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
601.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
600.1
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
596.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
595.5
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
595.4
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
589.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
585.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
581.1
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
578.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
575.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
573.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
568.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
566.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
566.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
555.4
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
551.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
547.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
545.9
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
545.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
544.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
543.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
542.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
542.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
540.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
539.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
539.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
532.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
531.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
528.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
524.2
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
523.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
514.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
514.4
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
502.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
499.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
498.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
493.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
492.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
481.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
476.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
475.1
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
466.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
464.5
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
463.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
458.3
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
456.6
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
449.4
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
448.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
447.2
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
445.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
440.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
426.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
426.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
410.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
401.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
387.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
387.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
383.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
375.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
368.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
342.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
471.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 471.2
Samples: 4
Max nTPM: 506.3
Min nTPM: 420.7
Sample A
Male
506.3
Sample B
Male
461.4
Sample C
Female
420.7
Sample D
Female
496.4
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.