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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
737.3
nTPM
HPA Brain:
238.0
nTPM
GTEx:
737.3
nTPM
FANTOM5:
14.9
Scaled Tags Per Million
Pig:
418.2
nTPM
Mouse:
561.5
nTPM
Allen mouse:
12.9
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
238.0
Sample id
Sample description
nTPM
Amygdala nTPM: 238.0
2695
Female, age 67, right hemisphere
283.0
2514
Male, age 75, right hemisphere
237.0
2517
Female, age 94, left hemisphere
234.8
2814
Male, age 76, right hemisphere
219.5
1987
Female, age 91, left hemisphere
215.7
Basal amygdala nTPM: 191.2
2827
Female, age 67, right hemisphere
232.8
2609
Male, age 75, right hemisphere
217.7
2110
Male, age 80, left hemisphere
214.2
2685
Female, age 94, left hemisphere
194.2
2243
Female, age 91, right hemisphere
150.9
1955
Male, age 76, both hemispheres
137.5
Central amygdala nTPM: 220.3
2826
Female, age 94, left hemisphere
320.9
2515
Male, age 75, right hemisphere
249.2
1905
Male, age 76, both hemispheres
185.6
2239
Male, age 80, left hemisphere
181.7
2701
Female, age 91, right hemisphere
164.0
Corticomedial amygdala nTPM: 186.8
2829
Male, age 80, left hemisphere
219.9
2428
Male, age 75, right hemisphere
218.2
2429
Female, age 94, left hemisphere
187.0
2535
Female, age 67, right hemisphere
185.0
2242
Female, age 91, right hemisphere
168.7
2240
Male, age 76, both hemispheres
142.0
Lateral amygdala nTPM: 219.1
2830
Female, age 67, right hemisphere
301.7
2516
Male, age 75, right hemisphere
274.3
2534
Female, age 94, left hemisphere
230.0
2256
Male, age 80, left hemisphere
186.5
2255
Female, age 91, right hemisphere
161.4
1883
Male, age 76, both hemispheres
160.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
737.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 737.3
Samples: 152
Max nTPM: 2225.6
Min nTPM: 382.0
Std nTPM: 270.9
Median nTPM: 684.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
2225.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
1888.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
1743.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
1658.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
1456.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
1292.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
1277.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
1268.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1259.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
1155.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
1153.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
1131.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
1071.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
1030.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
1010.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
1008.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
996.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
983.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
974.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
952.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
946.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
935.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
933.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
928.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
908.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
906.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
892.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
885.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
884.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
879.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
867.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
863.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
837.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
837.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
826.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
811.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
796.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
790.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
786.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
784.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
776.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
775.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
772.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
764.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
756.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
755.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
752.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
751.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
744.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
733.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
732.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
731.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
729.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
728.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
727.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
726.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
725.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
723.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
721.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
717.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
715.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
714.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
713.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
711.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
709.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
707.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
704.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
701.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
700.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
695.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
694.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
693.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
692.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
690.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
686.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
685.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
682.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
678.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
672.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
669.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
666.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
664.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
658.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
657.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
656.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
656.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
654.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
652.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
651.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
648.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
645.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
645.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
642.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
633.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
632.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
631.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
630.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
629.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
628.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
617.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
613.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
605.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
601.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
600.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
599.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
599.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
595.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
594.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
591.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
587.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
587.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
582.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
579.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
576.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
573.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
565.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
565.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
563.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
561.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
556.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
551.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
551.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
548.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
546.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
545.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
543.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
540.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
537.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
529.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
528.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
528.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
525.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
524.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
524.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
522.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
520.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
505.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
496.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
480.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
480.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
480.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
477.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
470.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
455.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
453.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
448.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
445.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
440.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
428.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
423.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
422.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
382.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
561.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 561.5
Samples: 4
Max nTPM: 599.2
Min nTPM: 522.7
Sample A
Male
522.7
Sample B
Male
599.2
Sample C
Female
575.2
Sample D
Female
548.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.