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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
200.3
nTPM
GTEx:
200.3
nTPM
FANTOM5:
275.8
Scaled Tags Per Million
Pig:
85.5
nTPM
Mouse:
435.9
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
200.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 200.3
Samples: 105
Max nTPM: 261.1
Min nTPM: 118.7
Std nTPM: 26.2
Median nTPM:
376_1
75 years, female
261.1
375_1
74 years, female
255.0
35_1
74 years, female
250.5
17_1
71 years, male
247.5
2_1
77 years, female
247.0
153_1
70 years, female
238.9
384_1
83 years, male
237.6
321_1
62 years, female
237.2
322_1
76 years, male
235.6
404_1
82 years, female
235.5
377_1
82 years, female
235.4
379_1
60 years, male
234.4
396_1
62 years, male
232.3
246_1
77 years, male
232.2
177_1
74 years, male
231.8
189_1
76 years, male
231.2
120_1
70 years, female
229.1
142_1
61 years, female
229.1
265_1
87 years, male
229.1
229_1
69 years, female
227.3
173_1
67 years, male
227.1
162_1
79 years, female
226.5
319_1
81 years, male
226.2
6_1
73 years, female
225.5
452_1
88 years, female
222.3
526_1
61 years, male
221.0
126_1
63 years, male
220.2
414_1
84 years, female
219.4
4_1
88 years, female
216.6
406_1
79 years, male
214.4
389_1
86 years, female
213.0
394_1
75 years, female
212.2
425_1
59 years, female
211.9
243_1
75 years, male
210.0
145_1
84 years, male
208.9
317_1
60 years, male
208.7
386_1
76 years, male
208.4
315_1
62 years, female
207.2
405_1
91 years, male
207.2
355_1
70 years, female
206.7
335_1
73 years, female
205.7
349_1
83 years, male
204.4
237_1
82 years, male
204.3
115_1
83 years, male
203.9
81_1
67 years, male
203.4
99_1
64 years, male
202.6
495_1
57 years, female
201.4
254_1
77 years, female
200.5
286_1
68 years, female
200.4
137_1
83 years, male
200.2
347_1
72 years, male
198.9
119_1
70 years, female
198.0
295_1
61 years, female
197.2
163_1
78 years, male
197.1
415_1
77 years, female
196.6
217_1
76 years, male
196.3
313_1
79 years, female
196.1
320_1
89 years, female
196.0
413_1
59 years, female
195.5
447_1
81 years, male
195.5
41_1
94 years, female
195.2
308_1
70 years, female
195.1
503_1
68 years, male
194.0
501_1
88 years, male
193.9
354_1
81 years, female
193.8
9_1
66 years, female
193.1
324_1
76 years, male
192.2
499_1
55 years, female
192.0
43_1
64 years, female
190.8
172_1
72 years, female
189.7
468_1
89 years, male
189.7
266_1
85 years, male
188.5
466_1
57 years, female
187.8
109_1
81 years, female
186.8
293_1
68 years, female
186.3
18_1
88 years, male
186.0
350_1
84 years, female
183.0
316_1
62 years, male
182.5
139_1
64 years, female
182.0
311_1
78 years, male
180.2
292_1
71 years, male
180.0
291_1
76 years, male
179.9
352_1
62 years, male
179.8
251_1
78 years, male
179.6
506_1
65 years, male
179.1
356_1
87 years, female
178.9
42_1
85 years, male
178.5
353_1
82 years, female
177.7
318_1
68 years, male
177.5
518_1
75 years, female
176.3
264_1
73 years, female
175.8
307_1
66 years, female
172.2
351_1
91 years, male
171.9
288_1
66 years, female
170.0
348_1
84 years, male
168.7
480_1
63 years, male
168.5
117_1
61 years, male
168.3
89_1
63 years, male
166.3
314_1
67 years, male
165.0
517_1
88 years, male
164.3
32_1
67 years, male
160.0
218_1
71 years, female
151.2
149_1
88 years, male
144.5
491_1
89 years, female
127.1
490_1
67 years, female
118.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.