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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
84.5
nTPM
HPA Brain:
67.8
nTPM
GTEx:
84.5
nTPM
FANTOM5:
114.0
Scaled Tags Per Million
Pig:
44.4
nTPM
Mouse:
51.4
nTPM
Allen mouse:
0.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
67.8
Sample id
Sample description
nTPM
Amygdala nTPM: 67.8
2695
Female, age 67, right hemisphere
90.7
2514
Male, age 75, right hemisphere
72.4
2814
Male, age 76, right hemisphere
62.8
1987
Female, age 91, left hemisphere
62.3
2517
Female, age 94, left hemisphere
50.9
Basal amygdala nTPM: 54.4
2609
Male, age 75, right hemisphere
89.9
2243
Female, age 91, right hemisphere
56.6
1955
Male, age 76, both hemispheres
53.4
2110
Male, age 80, left hemisphere
53.1
2685
Female, age 94, left hemisphere
38.3
2827
Female, age 67, right hemisphere
35.4
Central amygdala nTPM: 57.2
2515
Male, age 75, right hemisphere
73.5
1905
Male, age 76, both hemispheres
59.3
2239
Male, age 80, left hemisphere
55.2
2826
Female, age 94, left hemisphere
49.1
2701
Female, age 91, right hemisphere
48.7
Corticomedial amygdala nTPM: 56.5
2428
Male, age 75, right hemisphere
83.4
2829
Male, age 80, left hemisphere
64.1
2240
Male, age 76, both hemispheres
54.2
2242
Female, age 91, right hemisphere
51.6
2429
Female, age 94, left hemisphere
51.1
2535
Female, age 67, right hemisphere
34.8
Lateral amygdala nTPM: 54.0
2516
Male, age 75, right hemisphere
84.8
1883
Male, age 76, both hemispheres
60.0
2256
Male, age 80, left hemisphere
55.0
2255
Female, age 91, right hemisphere
44.1
2534
Female, age 94, left hemisphere
42.9
2830
Female, age 67, right hemisphere
36.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
84.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 84.5
Samples: 152
Max nTPM: 181.5
Min nTPM: 24.7
Std nTPM: 26.1
Median nTPM: 82.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
181.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
153.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
147.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
146.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
138.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
134.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
132.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
132.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
130.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
130.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
128.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
126.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
125.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
125.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
123.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
121.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
120.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
120.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
117.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
117.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
116.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
116.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
112.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
111.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
106.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
104.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
104.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
103.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
102.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
101.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
101.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
100.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
100.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
99.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
99.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
99.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
99.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
98.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
97.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
96.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
96.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
96.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
95.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
95.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
95.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
94.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
92.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
92.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
92.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
92.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
91.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
91.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
91.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
90.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
90.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
90.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
89.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
88.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
88.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
88.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
88.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
88.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
87.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
87.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
87.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
87.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
86.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
85.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
85.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
84.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
84.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
84.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
84.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
83.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
83.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
83.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
82.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
82.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
81.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
81.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
81.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
80.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
79.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
79.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
78.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
78.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
78.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
77.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
77.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
77.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
77.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
77.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
77.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
76.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
76.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
75.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
75.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
75.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
74.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
74.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
74.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
73.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
72.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
72.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
71.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
71.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
70.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
70.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
70.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
70.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
69.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
68.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
66.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
66.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
66.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
65.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
65.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
64.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
64.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
62.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
62.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
62.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
62.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
60.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
60.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
59.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
59.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
58.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
58.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
58.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
57.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
54.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
53.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
53.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
52.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
51.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
51.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
50.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
50.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
50.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
50.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
48.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
48.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
46.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
46.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
45.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
45.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
43.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
40.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
37.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
33.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
24.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
51.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 51.4
Samples: 4
Max nTPM: 62.0
Min nTPM: 45.0
Sample A
Male
45.0
Sample B
Male
50.8
Sample C
Female
62.0
Sample D
Female
47.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.