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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1045.1
nTPM
HPA Brain:
1111.2
nTPM
GTEx:
1045.1
nTPM
FANTOM5:
1507.2
Scaled Tags Per Million
Mouse:
332.4
nTPM
Allen mouse:
0.1
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1111.2
Sample id
Sample description
nTPM
Amygdala nTPM: 1060.7
2695
Female, age 67, right hemisphere
1297.6
1987
Female, age 91, left hemisphere
1217.2
2514
Male, age 75, right hemisphere
1098.3
2517
Female, age 94, left hemisphere
907.6
2814
Male, age 76, right hemisphere
782.9
Basal amygdala nTPM: 986.1
2609
Male, age 75, right hemisphere
1385.0
1955
Male, age 76, both hemispheres
1031.0
2243
Female, age 91, right hemisphere
1019.9
2827
Female, age 67, right hemisphere
887.9
2110
Male, age 80, left hemisphere
823.0
2685
Female, age 94, left hemisphere
769.8
Central amygdala nTPM: 1111.2
2515
Male, age 75, right hemisphere
1669.7
2826
Female, age 94, left hemisphere
1373.2
2239
Male, age 80, left hemisphere
897.9
2701
Female, age 91, right hemisphere
860.2
1905
Male, age 76, both hemispheres
755.2
Corticomedial amygdala nTPM: 938.0
2428
Male, age 75, right hemisphere
1318.9
2242
Female, age 91, right hemisphere
999.7
2240
Male, age 76, both hemispheres
961.6
2829
Male, age 80, left hemisphere
910.7
2535
Female, age 67, right hemisphere
801.1
2429
Female, age 94, left hemisphere
636.1
Lateral amygdala nTPM: 1079.0
2256
Male, age 80, left hemisphere
1412.8
2830
Female, age 67, right hemisphere
1265.0
2516
Male, age 75, right hemisphere
1239.2
2255
Female, age 91, right hemisphere
918.1
2534
Female, age 94, left hemisphere
892.1
1883
Male, age 76, both hemispheres
747.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1045.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 1045.1
Samples: 152
Max nTPM: 2428.8
Min nTPM: 108.6
Std nTPM: 409.3
Median nTPM: 969.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
2428.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
2425.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
2281.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
2154.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
2099.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
1923.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
1921.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
1897.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
1817.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1807.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
1760.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
1736.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
1715.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
1675.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
1620.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
1603.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
1538.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
1531.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
1491.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
1471.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
1466.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
1390.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
1355.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
1348.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
1343.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
1332.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
1331.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
1321.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1314.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
1310.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
1302.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
1300.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
1297.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
1261.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
1240.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
1236.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
1236.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
1234.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
1233.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1230.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
1230.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
1228.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
1224.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
1214.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
1212.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
1212.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
1203.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
1184.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
1177.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
1171.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
1159.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
1132.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
1132.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
1121.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
1117.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
1111.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
1111.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
1109.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
1079.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
1070.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
1046.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
1042.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
1041.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
1039.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
1034.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
1026.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
1015.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
1013.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
1012.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
999.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
988.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
981.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
980.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
975.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
974.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
972.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
967.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
952.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
947.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
946.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
934.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
934.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
930.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
923.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
919.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
916.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
912.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
906.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
904.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
898.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
897.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
894.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
886.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
878.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
869.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
866.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
853.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
850.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
843.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
840.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
839.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
838.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
836.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
835.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
830.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
824.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
824.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
815.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
810.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
798.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
798.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
797.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
789.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
788.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
777.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
774.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
770.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
767.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
763.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
762.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
757.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
753.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
711.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
705.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
700.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
694.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
693.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
684.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
679.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
679.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
679.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
677.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
669.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
666.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
655.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
632.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
624.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
622.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
621.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
614.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
610.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
608.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
607.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
592.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
561.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
529.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
473.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
384.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
381.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
278.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
142.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
108.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
332.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 332.4
Samples: 4
Max nTPM: 525.2
Min nTPM: 222.1
Sample A
Male
222.1
Sample B
Male
261.9
Sample C
Female
525.2
Sample D
Female
320.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.