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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
42.1
nTPM
HPA Brain:
66.3
nTPM
GTEx:
42.1
nTPM
FANTOM5:
34.0
Scaled Tags Per Million
Pig:
25.4
nTPM
Mouse:
17.9
nTPM
Allen mouse:
1.1
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
66.3
Sample id
Sample description
nTPM
Amygdala nTPM: 66.3
2695
Female, age 67, right hemisphere
93.5
2814
Male, age 76, right hemisphere
68.6
1987
Female, age 91, left hemisphere
64.1
2517
Female, age 94, left hemisphere
55.0
2514
Male, age 75, right hemisphere
50.1
Basal amygdala nTPM: 49.2
1955
Male, age 76, both hemispheres
65.0
2243
Female, age 91, right hemisphere
53.7
2609
Male, age 75, right hemisphere
51.9
2110
Male, age 80, left hemisphere
50.4
2685
Female, age 94, left hemisphere
43.7
2827
Female, age 67, right hemisphere
30.3
Central amygdala nTPM: 62.0
2515
Male, age 75, right hemisphere
85.4
1905
Male, age 76, both hemispheres
76.7
2239
Male, age 80, left hemisphere
55.2
2701
Female, age 91, right hemisphere
50.9
2826
Female, age 94, left hemisphere
42.1
Corticomedial amygdala nTPM: 52.8
2242
Female, age 91, right hemisphere
64.0
2240
Male, age 76, both hemispheres
56.8
2428
Male, age 75, right hemisphere
56.4
2429
Female, age 94, left hemisphere
50.2
2829
Male, age 80, left hemisphere
50.0
2535
Female, age 67, right hemisphere
39.3
Lateral amygdala nTPM: 49.9
2256
Male, age 80, left hemisphere
64.7
1883
Male, age 76, both hemispheres
64.5
2255
Female, age 91, right hemisphere
54.4
2516
Male, age 75, right hemisphere
44.9
2534
Female, age 94, left hemisphere
35.8
2830
Female, age 67, right hemisphere
34.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
42.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 42.1
Samples: 152
Max nTPM: 184.0
Min nTPM: 3.5
Std nTPM: 25.1
Median nTPM: 38.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
184.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
145.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
117.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
100.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
99.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
87.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
82.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
82.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
82.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
80.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
80.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
79.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
79.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
78.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
75.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
75.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
75.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
74.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
69.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
67.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
65.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
62.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
61.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
60.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
60.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
57.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
57.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
56.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
56.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
55.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
54.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
54.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
53.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
53.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
53.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
52.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
51.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
51.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
50.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
49.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
49.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
49.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
48.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
48.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
47.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
47.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
47.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
47.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
47.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
46.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
46.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
45.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
44.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
44.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
44.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
44.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
44.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
44.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
43.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
43.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
42.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
42.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
42.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
42.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
41.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
41.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
40.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
40.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
39.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
39.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
39.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
39.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
38.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
38.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
38.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
38.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
38.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
38.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
38.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
37.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
37.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
37.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
36.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
36.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
35.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
35.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
35.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
35.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
34.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
34.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
34.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
34.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
33.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
33.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
33.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
32.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
32.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
31.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
31.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
31.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
29.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
29.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
28.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
28.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
28.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
28.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
27.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
27.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
27.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
27.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
26.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
26.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
25.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
25.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
25.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
25.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
24.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
24.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
23.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
23.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
23.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
22.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
22.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
22.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
21.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
21.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
21.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
21.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
20.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
20.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
20.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
20.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
20.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
19.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
19.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
19.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
18.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
16.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
16.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
15.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
15.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
12.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
12.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
11.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
10.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
9.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
9.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
9.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
8.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
8.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
7.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
3.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
17.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 17.9
Samples: 4
Max nTPM: 19.3
Min nTPM: 16.3
Sample A
Male
16.3
Sample B
Male
16.9
Sample C
Female
19.3
Sample D
Female
19.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.