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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
63.3
nTPM
HPA Brain:
156.8
nTPM
GTEx:
63.3
nTPM
FANTOM5:
96.0
Scaled Tags Per Million
Pig:
37.7
nTPM
Mouse:
47.0
nTPM
Allen mouse:
4.7
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
156.8
Sample id
Sample description
nTPM
Amygdala nTPM: 98.1
2814
Male, age 76, right hemisphere
140.7
2517
Female, age 94, left hemisphere
107.6
1987
Female, age 91, left hemisphere
99.0
2514
Male, age 75, right hemisphere
81.7
2695
Female, age 67, right hemisphere
61.4
Basal amygdala nTPM: 156.8
2827
Female, age 67, right hemisphere
214.0
2243
Female, age 91, right hemisphere
177.0
2685
Female, age 94, left hemisphere
167.6
2609
Male, age 75, right hemisphere
143.9
1955
Male, age 76, both hemispheres
126.4
2110
Male, age 80, left hemisphere
112.0
Central amygdala nTPM: 126.1
2826
Female, age 94, left hemisphere
194.2
1905
Male, age 76, both hemispheres
132.2
2239
Male, age 80, left hemisphere
127.9
2515
Male, age 75, right hemisphere
97.5
2701
Female, age 91, right hemisphere
78.7
Corticomedial amygdala nTPM: 139.7
2535
Female, age 67, right hemisphere
200.6
2242
Female, age 91, right hemisphere
172.4
2829
Male, age 80, left hemisphere
152.6
2428
Male, age 75, right hemisphere
118.2
2429
Female, age 94, left hemisphere
104.9
2240
Male, age 76, both hemispheres
89.5
Lateral amygdala nTPM: 134.5
2534
Female, age 94, left hemisphere
183.0
2830
Female, age 67, right hemisphere
155.0
2256
Male, age 80, left hemisphere
137.4
1883
Male, age 76, both hemispheres
129.8
2255
Female, age 91, right hemisphere
123.5
2516
Male, age 75, right hemisphere
78.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
63.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 63.3
Samples: 152
Max nTPM: 132.4
Min nTPM: 12.6
Std nTPM: 28.4
Median nTPM: 60.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
132.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
129.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
127.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
127.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
123.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
123.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
118.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
117.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
111.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
110.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
110.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
110.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
109.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
108.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
105.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
105.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
102.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
101.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
100.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
98.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
97.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
96.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
95.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
94.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
93.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
92.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
90.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
89.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
89.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
89.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
87.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
86.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
86.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
85.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
84.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
83.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
83.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
82.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
82.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
82.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
81.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
81.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
80.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
80.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
80.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
78.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
78.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
76.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
75.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
75.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
75.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
75.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
74.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
74.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
72.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
72.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
72.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
72.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
70.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
69.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
69.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
69.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
68.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
67.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
65.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
65.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
65.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
64.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
64.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
63.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
62.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
62.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
62.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
61.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
61.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
61.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
60.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
60.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
60.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
59.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
58.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
58.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
58.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
56.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
56.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
55.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
55.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
53.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
53.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
52.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
51.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
50.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
50.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
50.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
50.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
49.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
49.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
48.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
48.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
48.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
48.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
47.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
46.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
46.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
46.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
45.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
45.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
42.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
41.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
41.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
41.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
41.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
39.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
39.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
39.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
38.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
38.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
38.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
37.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
37.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
36.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
36.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
36.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
35.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
35.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
35.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
35.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
35.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
34.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
33.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
32.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
32.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
32.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
32.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
29.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
29.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
29.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
28.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
28.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
27.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
26.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
25.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
25.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
23.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
21.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
17.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
17.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
17.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
16.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
16.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
16.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
12.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
47.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 47.0
Samples: 4
Max nTPM: 49.2
Min nTPM: 44.6
Sample A
Male
49.2
Sample B
Male
44.6
Sample C
Female
48.1
Sample D
Female
46.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.