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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
217.6
nTPM
GTEx:
217.6
nTPM
FANTOM5:
1209.3
Scaled Tags Per Million
Pig:
253.2
nTPM
Mouse:
774.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
217.6
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 217.6
Samples: 105
Max nTPM: 357.1
Min nTPM: 139.9
Std nTPM: 42.8
Median nTPM:
353_1
82 years, female
357.1
218_1
71 years, female
331.2
17_1
71 years, male
312.9
352_1
62 years, male
305.6
4_1
88 years, female
299.3
452_1
88 years, female
298.2
139_1
64 years, female
297.8
351_1
91 years, male
292.7
315_1
62 years, female
278.0
356_1
87 years, female
274.0
42_1
85 years, male
271.9
501_1
88 years, male
269.6
41_1
94 years, female
269.5
163_1
78 years, male
269.3
354_1
81 years, female
266.8
322_1
76 years, male
264.2
379_1
60 years, male
259.4
350_1
84 years, female
259.3
495_1
57 years, female
256.2
307_1
66 years, female
255.4
288_1
66 years, female
254.6
375_1
74 years, female
252.7
89_1
63 years, male
247.6
355_1
70 years, female
243.1
295_1
61 years, female
240.0
2_1
77 years, female
238.6
6_1
73 years, female
237.9
319_1
81 years, male
237.9
413_1
59 years, female
237.7
137_1
83 years, male
237.5
264_1
73 years, female
237.5
237_1
82 years, male
236.8
320_1
89 years, female
236.6
153_1
70 years, female
235.1
314_1
67 years, male
233.9
35_1
74 years, female
233.0
384_1
83 years, male
231.3
518_1
75 years, female
231.2
377_1
82 years, female
229.8
313_1
79 years, female
229.2
119_1
70 years, female
228.7
311_1
78 years, male
227.0
376_1
75 years, female
227.0
109_1
81 years, female
225.0
173_1
67 years, male
224.3
321_1
62 years, female
224.2
142_1
61 years, female
223.3
349_1
83 years, male
220.8
120_1
70 years, female
220.1
396_1
62 years, male
219.6
254_1
77 years, female
219.0
506_1
65 years, male
215.9
386_1
76 years, male
214.2
246_1
77 years, male
210.4
316_1
62 years, male
208.1
117_1
61 years, male
207.0
317_1
60 years, male
206.6
308_1
70 years, female
206.5
414_1
84 years, female
206.5
286_1
68 years, female
204.6
266_1
85 years, male
204.3
526_1
61 years, male
203.4
447_1
81 years, male
202.2
99_1
64 years, male
200.9
145_1
84 years, male
200.7
499_1
55 years, female
200.4
293_1
68 years, female
199.7
43_1
64 years, female
198.4
292_1
71 years, male
194.2
394_1
75 years, female
191.8
265_1
87 years, male
190.5
243_1
75 years, male
190.3
251_1
78 years, male
190.1
217_1
76 years, male
189.9
466_1
57 years, female
188.6
389_1
86 years, female
188.5
189_1
76 years, male
187.9
172_1
72 years, female
187.6
335_1
73 years, female
187.2
347_1
72 years, male
186.9
491_1
89 years, female
184.6
18_1
88 years, male
184.3
503_1
68 years, male
182.9
126_1
63 years, male
179.7
318_1
68 years, male
179.0
229_1
69 years, female
178.0
468_1
89 years, male
176.0
81_1
67 years, male
175.7
177_1
74 years, male
173.7
162_1
79 years, female
172.4
480_1
63 years, male
170.6
404_1
82 years, female
168.0
32_1
67 years, male
167.3
348_1
84 years, male
165.6
324_1
76 years, male
165.3
425_1
59 years, female
164.9
517_1
88 years, male
161.9
406_1
79 years, male
161.2
149_1
88 years, male
158.1
291_1
76 years, male
156.1
405_1
91 years, male
155.8
415_1
77 years, female
155.1
115_1
83 years, male
151.3
9_1
66 years, female
149.2
490_1
67 years, female
139.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.